Drosophila erecta: 6549605 Help Entry 6549605           CDS       T01060                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism der  Drosophila erecta Pathway der03040   Spliceosome Brite KEGG Orthology (KO) [BR:der00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     6549605  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:der03019]     6549605    03041 Spliceosome [BR:der03041]     6549605 Messenger RNA biogenesis [BR:der03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      6549605 Spliceosome [BR:der03041]  Complex B   Other components    Prp19-related factors     6549605  Complex C     6549605 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 Suf TPR_2 Mad3_BUB1_I TPR_15 TPR_8 TPR_12 RPN7 ARM_TT21_C PPR DHR-2_Lobe_A ARM_TT21 TPR_10 TPR_9 Motif Other DBs NCBI-GeneID:  6549605 NCBI-ProteinID:  XP_001975738 UniProt:  B3NRI6 LinkDB All DBs Position Unknown AA seq 882 aa AA seqDB search MVTKASKSLNLEINFEEEDVPYEEEILRNAYSVKHWLRYIDHKAKAPDNGVNLVYERALK ELPGSYKIWHNYLRTRRKQVRGKIPTDPMYEEVNSAFERALVFMHKMPRIWMDYGAFMTS QCKVTRTRHVFDRALRALPITQHGRIWPLYLQFVRRFEMPETALRVYRRYLKLFPEDTEE YVDYLQEADRLDEAAQQLAHIVDNEHFVSKHGKSNHQLWNELCDLISKNPHKVHSLNVDA IIRGGLRRYTDQLGHLWNSLADYYVRSGLFDRARDIYEEAIQTVTTVRDFTQVFDEYAQF EELSLNKRMEQVAANEAATEEDDIDVELRLSRFEYLMERRLLLLNSVLLRQNPHNVHEWH KRVTLYEDKPAEIISTYTEAVQTVQPKQAVGKLHTLWVEFAKFYEANGQVEDARVVFERG TEVEYVKVEDLAAVWCEWAEMELRQQQFEAALKLMQRATAMPKRKIAYHDDTETVQARLH RSLKVWSMYADLEESFGTFKTCKSVYERIIDLKICTPQIVINYGMFLEEHNYFEEAYRAY EKGISLFKWPNVYDIWNSYLTKFLERYGGTKLERARDLFEQCLDQCPPEHAKYFYLLYAK LEEEHGLARHAMSVYDRATAAVKEEEMFDMYNIFVKKAAEIYGLPRTREIYEKAIESLPE QNMRQMCVKFAELETKLGEVDRARAIYAHCSQVCDPRITADFWQTWKEFEVRHGNEDTMR EMLRIKRSVQATYNTQVNMMAAQFLSTNNGAAADAGAGAGPDAMRLLEEKARQAAAEAKQ KPTEKAASNIMFVRGETQGGAKDKKDTVVNPDEIDIGDSDEDEEEDDDEENEMSNENTAS AAATKTDEEGLVMKKLRFEQKAIPAKVFGSLKPSNQGDSDGE NT seq 2649 nt NT seq  +upstreamnt  +downstreamnt atggtgacaaaagcgagtaaatctctgaatttagagataaatttcgaagaggaggacgtg ccgtatgaggaggaaatccttcggaacgcctactccgtaaaacattggctgcgctacata gaccacaaagcgaaggcgccggataatggtgtaaacctggtctatgaacgtgcccttaag gagctccctggcagctataagatctggcacaattacctgagaacccgcaggaagcaggtg cgcggtaaaatacccacggatcccatgtacgaggaggtcaacagcgcctttgagcgcgca ctcgtgttcatgcacaaaatgccacgtatctggatggactacggtgcctttatgacctcc caatgcaaggtgacccgcacccggcacgttttcgatcgggctctaagggctctgcccatc acgcagcacggcaggatttggccactgtatctgcagtttgtgcgccgctttgaaatgccg gaaacagcgctacgggtctaccgacgatatctgaaactcttccccgaggacaccgaggag tatgtggactacctacaggaagcggaccgcctggacgaagctgcgcagcagctggcgcac atcgtagacaacgaacacttcgtttccaagcacggcaagtccaatcatcagctgtggaac gaactgtgcgacctcatctcgaagaatccacacaaggtgcactccctaaatgtggacgcc atcattcgcggtggactgcggcgctacaccgatcagttgggccacctgtggaactccctg gcggattactatgtgcgttccggtttatttgatcgggcaagagatatatacgaggaagcc attcaaaccgtgaccaccgtaagggacttcacacaagtctttgatgaatacgcacagttc gaggaactctcgctgaacaaacgcatggagcaggtagctgccaatgaggcggccaccgag gaagacgacatcgacgttgaactgcgcctctcacgcttcgaatacctcatggagcgccgt ttgctgctgttgaatagcgtgctactgcgccagaatccccacaacgtgcacgagtggcac aagcgggtgacactgtacgaggacaagcccgccgaaatcattagtacgtacaccgaggcc gtgcaaacagtgcagccgaagcaggcggttggaaagctgcacaccctgtgggtggagttc gccaagttctacgaggccaacggacaggtggaggatgctcgtgtggtcttcgaacgcggc actgaggttgagtatgtcaaagtagaggatctggcggcggtgtggtgcgaatgggcagag atggagctacgacagcagcagttcgaggcggcgctcaagctgatgcagagggcgacggcc atgccaaagcgaaagattgcctatcatgatgatacggagacggtgcaggcgcgccttcat cgctccttaaaagtgtggtccatgtacgctgatttggaggagtcattcggcaccttcaag acctgcaaatccgtctacgagcggattatcgacctgaagatctgtacgccgcagatcgtt atcaattacggaatgttcctcgaggagcacaactactttgaggaagcctaccgagcctat gagaagggcatctctctgttcaagtggcccaatgtatacgacatctggaactcctaccta accaaattcttggagcgttatggcggcacaaaactagagcgcgccagggatctcttcgag cagtgcctggatcagtgtcctcccgaacacgccaagtacttttacttactgtacgctaag ttggaagaggagcacggtctcgcccggcatgccatgtcggtttatgatcgcgccacggct gctgttaaagaggaggagatgttcgacatgtacaacatatttgtaaagaaggcagccgag atctatggcctgccacgcacccgcgagatctatgagaaggccatcgaatcgctgcccgag cagaatatgcgccaaatgtgtgtcaagttcgcggagttggaaacgaagttgggcgaagtg gatcgtgctagagccatctatgcgcattgctcacaggtttgtgatccccgcatcaccgct gacttttggcaaacttggaaggagttcgaggtgcgtcacggcaacgaagacacaatgcgc gaaatgctgcgcatcaagcgctccgtgcaggccacttacaatacgcaagtgaacatgatg gccgcccaattcctgagcacaaacaacggagcggctgcggatgccggagcaggagctgga ccggatgccatgcgattgctggaggagaaagcacgccaagcggcagccgaggccaaacaa aagcccaccgagaaggcggcctcaaacattatgtttgtgcgcggcgagacgcagggaggt gccaaggacaaaaaggatacggttgtcaatcctgatgaaattgacattggagacagcgac gaggacgaggaggaggacgacgatgaggagaacgagatgtcgaacgagaacacggccagt gcagcggccacaaaaaccgacgaggaaggcctcgtcatgaagaaactgcgctttgagcag aaggccattccagccaaggtcttcggcagcctcaagccctcaaatcaaggcgactctgat ggagagtga

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