Drosophila erecta: 6549640
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Entry
6549640 CDS
T01060
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
der
Drosophila erecta
Pathway
der03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6549640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
der03019
]
6549640
Enzymes [BR:
der01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
6549640
Messenger RNA biogenesis [BR:
der03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
6549640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
MMR_HSR1
AAA_22
TniB
ATP_bind_1
CbiA
nSTAND3
AAA_16
AAA_18
Motif
Other DBs
NCBI-GeneID:
6549640
NCBI-ProteinID:
XP_001975758
UniProt:
B3NRK6
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MSEDHGKDYTLEADSELRFEIEHKDAKVLVSLVSGFAELFGTELVKKKQYEFGVGAKVAI
FTYQGCVLHVSGKMDVCYISKETPMVQYVNCHTALEQFRMEAEEKDRHGPVAMVVGPMDV
GKSTLCRILLNYAVRVGRRPLYADLDVGQGSIAISGNVATILIERPANVEEGFSKTAPLV
YHFGHKSPGANSILYNAVVSKMAEVTLHSLNSNKRTKSSGIIINTCGWVKGSGYAHLLHA
AKAYGACAIFVLDQERLYNELLRDVPKGVHVVLLPKSGGVVERSKEQRHEARDQRVKEYF
YGNARAPFYPFSFEVKFQDLRLYKIGAPPLPDSCMPLGMKAEDNKTKVVAVTPTPALIHH
VLALSFSESVEDDVIGTNVAGFCCVTEVDMERQAVMLLSPQPRPLPPNALLLWSELQFMD
NHT
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggaccatggcaaagactacacactggaggccgactccgagctgcgctttgag
atcgagcacaaggacgccaaagtgctggtgtcccttgtcagcggatttgcggagctgttc
ggcacggagctggtgaagaaaaagcaatacgagttcggcgtgggcgccaaggtggccatc
ttcacgtatcagggctgtgtgctccacgtttccggtaaaatggacgtgtgctacatctcc
aaggagacaccgatggtgcagtacgtcaactgccacacggcactggagcaatttcgcatg
gaagccgaggagaaggatcgccacggaccagttgccatggtcgtcggtccaatggacgtg
ggcaagagcactctctgccgcattctgctcaactacgctgtgcgcgtgggacgtcgcccg
ctgtacgccgacttggacgtgggacagggctccattgccatttccggcaatgtggccacc
atcctcatcgagcgacctgcgaacgtggaggagggattctccaaaacagcgccgctggtc
tatcactttggccataagtcgcccggcgccaacagcatcttgtacaacgctgtggtttcc
aaaatggccgaggtcacgctgcattccctgaacagcaacaagcgaacaaaaagctccggc
atcatcataaacacttgtggctgggtaaagggctccggctatgcgcacctgttgcacgcg
gccaaagcttatggagcctgcgccatcttcgttctggaccaggagcgactgtacaacgag
ctgctacgggacgtgcccaagggtgttcatgtggtactgctgcccaagagcggcggtgtc
gtagagcgcagcaaagagcagcggcacgaggcgagggatcagcgcgttaaggagtacttc
tacggcaatgcaagggcgcccttttatccgttcagcttcgaggtgaagttccaggacctg
cgactgtacaagatcggggcaccgccgctgcccgactcctgcatgccacttggaatgaag
gcggaggataacaagaccaaggtggtcgctgttactcccacacccgcgcttatccatcat
gtgctggcactaagcttctccgagtccgtggaggatgatgtgattggcaccaacgtagct
ggcttctgctgcgtaaccgaagtggatatggaaagacaggcggtgatgttgctttcgccg
caaccgcgtcctttgcccccgaacgccctgctcctgtggtcagaactccaattcatggac
aatcacacctag
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