Drosophila erecta: 6550224
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Entry
6550224 CDS
T01060
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
der
Drosophila erecta
Pathway
der03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6550224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
der03041
]
6550224
Enzymes [BR:
der01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
6550224
Spliceosome [BR:
der03041
]
Complex C
Other components
Step II factors
6550224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
AAA_22
DEAD
AAA_19
Microtub_bd
nSTAND3
T2SSE
SLFN-g3_helicase
Flavi_DEAD
cobW
SRP54
ABC_tran
AAA_16
ATPase
Motif
Other DBs
NCBI-GeneID:
6550224
NCBI-ProteinID:
XP_001978192
UniProt:
B3NVV4
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MSDDEESGVHRLEGTAGQETRGGLVIRKHKDAGEKQGGGGFKVPQGSLLGLDKLAAKRRA
EKERSERLISFQDSEFDDTGGGSSTPQANASIGSSEFAFKKPDTKSFEKLRGQLREHKDE
TPSHTGGVSEKARERLREHIQRDRKRGPVSTTSEGKDRDRDWDRDRRRERDRERERDRDR
RHHRDRGREHDRHRSRDRDRGRERSMSERSVHTPREPGTPGGSGGGVSNSSWDDEDGEFS
QRKSDWDMPTPRRHGSQSRDWSVRSGGGRRHHGRQDDTARPTPAHRYNQWAHDRKRSGAT
PWGEDPESLDLWEEEQRRLDREWYNIDEGYDDENNPFGGANSEYFRKREEQLEQKRTKRI
SAQQRQNNRDNELWERNRMLTSGVVTSISVNDDFDEEALERVHLLVHHIIPPFLDGRIVF
TKQPEPVVPVKDPTSDMALLARKGSALVRNYREQKERRKAQKKHWELSGTKLGNIMGVQR
PQDDEDARFDKDKDTADYRKDQKFADHMRDQETGGKSDFSRKKTISEQRRFLPVFASRQE
LLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRGMIGCTQPRRVAAMSVAKRVSDE
MDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYAAIIMDEAHERSLS
TDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVMFSKNTC
EDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEERLAEIDNAPALSILPIYS
QLPSDLQAKIFQKSGDGVRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDAL
QIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLKS
LGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLI
VACRMGCSAEVLIIVSMLSVPSIFYRPKGREEEADGVREKFQRPESDHLTYLNVYQQWRQ
NNYSSSWCNDHFIHIKAMRKVREVRQQLKDIMTQQNLSVVSCGIDWDIVRKCICSAYFYQ
AARLKGIGEYVNLRTGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGYW
LAELGPMFFSVKESGRSGREKKKQAAEHLKEMEEQMLKAQHEMEERKQQAAEREEQLAAK
QEIATPGNATPRRTPARIGL
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgacgaggagtccggtgtccaccggctggagggcaccgccggccaggagacg
cgcggcgggctggtcatccggaagcacaaggatgccggcgaaaagcaaggtggaggtggg
ttcaaggtgccgcagggatcgctgttgggcctggacaagctggcggccaagcgacgtgcc
gagaaggagcgatcggagcgactgatctccttccaggacagcgaattcgatgacaccggc
ggtgggagctctacgccgcaggccaacgcctccatcggttccagtgagttcgcctttaag
aaaccggacaccaaaagcttcgagaagctgcgcggccagctgcgcgagcacaaggacgag
acgccctcgcacaccggcggcgtttccgagaaggcacgcgagcgtctgcgtgagcatatc
cagcgggacagaaaacgcggcccagtcagcaccacatcggagggcaaggacagggatcgc
gactgggatcgtgatcgacgcagggagcgagacagagagcgggaacgtgaccgcgacagg
cgccaccatagagacaggggcagggaacacgatcgtcaccgcagccgggatagagatcgt
ggtcgtgaacgctccatgtccgagcgcagtgtccacacgccacgggagccgggtacgcca
ggcggcagtggcggcggtgtgtccaatagctcatgggacgacgaggacggcgagttcagc
cagcgcaagtcggactgggacatgcccacgcccagacgacacggcagccagtcacgtgat
tggtcagtgaggagcggtggcggccgccggcatcacggacgccaagatgacactgcccgg
ccaacgccagcacatcgctacaatcagtgggcccacgatcgcaagcgaagcggcgcgacg
ccctggggcgaggacccggagtcgctggatctgtgggaggaggagcagcgtcgcctggac
cgcgagtggtacaacattgacgagggctacgacgatgagaataatccttttggcggcgcc
aactccgagtacttccgcaagcgcgaggagcagctagagcagaagagaacaaagagaatc
agcgctcagcagcgccagaacaaccgggacaacgagctgtgggagcgtaaccgcatgctc
acttcgggcgtggtcacatcgatcagcgtgaacgacgacttcgatgaggaggcgctggag
cgagtgcatctcctggtgcatcacataataccgccgttcctcgacggacgcatcgtgttc
accaagcagccggagccggtggtgcccgtcaaggatcccacctcggatatggcgctgttg
gcgcggaagggcagcgccctggtgcgcaactatcgtgagcaaaaggagcggcgcaaggcc
cagaagaagcactgggagctgagcggcaccaagctgggcaacatcatgggtgtacagcgg
ccgcaggacgacgaggatgcccgttttgacaaggacaaggacacggccgactatcgcaag
gaccagaagttcgccgaccacatgcgcgaccaggagacgggcggcaagagcgacttctcg
cgcaaaaagaccatctcggagcagcgccgcttcctgcccgtgttcgcctcgcgccaagag
ctgctcaacgttatccgtgagaactcggtgatcatcatcgtgggcgagacgggcagcggc
aagaccacgcagctcacccagtaccttcacgaggatggctacagcaagcgcggcatgatc
ggttgcacgcagccgcgtcgagtggccgccatgtcggtggccaagcgcgtctcggacgag
atggacacccagctgggcgaagatgtgggctatgccatccgattcgaggactgcacatcg
gagcgcacggtcatcaagtacatgacggatggtatcctgctccgcgagagtctgcgggat
cccgaactggacagctacgccgccatcatcatggacgaggcccacgagcgatccctgtcc
acggacgtgctcttcggattgctgcgagagattgtggcccggcgacatgacctcaagctg
atcgtgacctccgccacgatggactcgagcaagtttgccaccttcttcggcaacgtgccc
acgttcaccattccgggacgcacctttcccgtggacgtgatgttcagcaagaacacctgc
gaggattacgtggaatcggcggtgaagcaggcactgcaggttcacctcacacccaacgag
ggcgacatgctcatcttcatgcccggccaggaggacatcgaggtgacgtgcgaggtgctc
gaggagcggctggcggagatcgataatgcgccggcccttagcatcctgcccatctattcg
cagctgccgtccgatttgcaggcaaagatctttcagaaatccggcgatggagtacgcaag
tgcgtggtggccacgaacatagccgaaacatcgctcaccgtcgacggcatcatctacgtg
atcgattccggctactgcaaactgaaggtctacaatccgcgcatcggcatggacgccctg
cagatctatcccatctcgcaggccaatgccaatcagcgaagcggtcgtgccggacgcaca
ggacccggtcaggcgtaccgcctgtacacgcagcggcagtataaggacgagctgttggcc
ctcaccgttcccgagattcagcgcaccaatctggccaacacagtgctgctgctcaaatca
ctgggcgtcgtcgatctgctgcaattccacttcatggatccaccaccgcaggataatatt
ctgaactcgctgtaccagctgtggatcctgggagcactggaccacaccggtgcgctcacc
acactgggtcgccagatggccgagttcccgctggatccgccccaatgccagatgctcatc
gtggcctgtcgcatgggctgcagtgccgaggtgctgatcatagtttccatgttgtccgtg
ccctcgatcttctaccgtccaaagggccgcgaggaggaggcggatggagtgcgcgagaag
ttccagaggcccgagtccgatcacctgacctacctcaacgtttatcagcagtggcgccag
aacaactacagttcgtcctggtgcaacgatcactttatccacatcaaggcgatgcggaag
gtgcgcgaggtgcggcagcagctgaaggacatcatgacgcagcagaacctgagcgtggta
agctgcggcatcgactgggacattgtgaggaagtgcatctgctcggcgtacttctaccag
gcggccaggctcaagggcatcggagagtatgtgaatctgcgaacgggcatgccctgccac
ctgcatcccacctccgcgctgtatggcttgggcaccacgcccgactatgtcgtctatcat
gagctgatcatgaccgccaaggagtacatgcagtgcgccaccgctgtcgatggctactgg
ctggcggagttgggtcccatgttcttctcggtgaaggagtccggtcgcagcgggcgtgag
aagaaaaaacaggcggccgagcatctgaaggagatggaggagcagatgctgaaggcacag
cacgagatggaggagcgcaagcagcaggcagccgagcgggaggagcagctggccgccaag
caggagatcgccacaccgggcaatgccacgccccgacgcacgccggccaggattggcctc
tga
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integrated database retrieval system
