Drosophila erecta: 6550387
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Entry
6550387 CDS
T01060
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
der
Drosophila erecta
Brite
KEGG Orthology (KO) [BR:
der00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
der03019
]
6550387
Enzymes [BR:
der01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
6550387
Messenger RNA biogenesis [BR:
der03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
6550387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
OB_NTP_bind
DEAD
HA2_C
AAA_16
nSTAND3
HA2_N
AAA_22
ATPase
Motif
Other DBs
NCBI-GeneID:
6550387
NCBI-ProteinID:
XP_001977769
UniProt:
B3NVN1
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MSRKSKTADRHSSTRHRTEINLIDFSFLDCKAELSGLLQAKSRQAGRSLVEDEADFWKFV
AKYEAMMRSTGQPVLPQRLAEAELTSVQPYHRSKHLALRLNADELLHEAHNEKQAQFRHL
ILVYLDFRQTEKFQRIRKLRQTQRNLPIARFRQELREALDTSRVVIVAGDTGCGKSTQVP
QFLYDFGYRSIACTQPRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTQLTNIIFIT
EGLLLRQLAVAANLDQYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATINV
ELFHGYFREEGARLVQVPGRLFPIKLRYLPPPALELKAGQARSASKRSQSTRIDPAPFVQ
VLSLIDQQYPTSERGDVLIFVSGVNEIESVVEAVQEYATEQSHWLVLPLHSGQAIAEQGK
VFDYAPEGMRKCIVSTNIAETSLTVDGVRFVVDSGKVKEMSYDATSKGQRLKEFWVSKSS
ADQRKGRAGRTGPGVCFRLYTAEQFNAFEAYPTPEIYRVPLDTMLLQMVSMGLPDVRAFP
FIEAPETERIEQTILTLKQHCALSVDEKLTPLGSSLANLPVELSIGKMLLMGCVFPEMEQ
LLTLAAMLSVQNPLTNRAHTDQRCVRERESLESDQGDIFTLVRLYREWVQLKMRRDGTRQ
WCRRLGIEEQRFYEVTKLRQQFQRILESCGMVVASGSDSQLTRAERATRHGELRQLKAMK
RRQRFEQPRQRKLLKQSAGRAAEDEEERDEVQGDDMRDVDFRLRLDPRQLSLLERSARLD
RHRDVVLLKLLLGSGFYPQFAISDEFNYCKGGGQQFFHTRLKPFLLQHPNSHFAKHFELL
KLANSDLLPKPDFYTPKHPLSERHQLLCYQSLLETAKPYLINCIRLPAAQTLLLFSFAID
TNAGITQIACDDWLGLDLPMPGSGMELLSRAIELRRRWSRLLYAKLDDLNSKQEAHSHSS
DDRSSALWHDLVDYMALDVAYAIRRLLPADIKRLYSHQAPSARLAKLKENPFAVDYPMTP
NEEKGGLNVSEHVVYSCLAEQKWTTAMDAALRAEPWQCTRCDFKLEEFDVLEQLVHRTKC
KGRKAQGRKSKPTSTEISTEAAGSSSSHSSGGYYCDTCNKELRMTNIDILRHKKQCQSNK
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggaaatcaaagacagcagataggcattcctccactcgccacaggactgagatc
aaccttattgacttcagtttcttggactgcaaggcagagctgtcgggcctgctgcaggcc
aagagccgccaggcaggcaggagtctggtggaggacgaggcagacttctggaagttcgtg
gccaagtacgaggccatgatgcgctccacgggccaaccggtgctgccgcaacggctcgcg
gaggcggagctgaccagcgtgcaaccgtatcaccgcagcaaacacttggcactgcgactg
aacgctgacgagctgcttcatgaggcgcacaacgaaaaacaggcccagttccggcatctt
attctagtgtacctagacttccgccagacggagaagttccagcgcatccgaaagctgcgg
cagacacagcgcaatctccctattgctcgcttccgacaggaattgcgcgaggcactggac
acgtcccgcgtggtaatcgtggccggtgacacgggctgcggcaagtccacacaggtgccc
cagtttctttacgactttggctaccgcagcattgcttgcacccagccgcgccgcttggcc
tgcgtctccctgtgcaagcgcgtggcgcacgagctgctggacgactacggcagtcgggtg
gccttccagattcgcttcgagcgcagccggacgcagctcaccaacattatttttatcacg
gagggtctgttgctgcgccaactggcggtggccgccaacctagaccagtacgacgccctc
attttggacgaaatccacgagcgcaacttgttcggtgacttcctactgggtgtgaccaag
tgtctgctgagggcgcggccgcaactgaagctgatactcatgtctgctaccatcaacgtg
gagctcttccacggctacttccgcgaggagggcgcacggctggtgcaggttccgggtcgc
ctctttcccatcaagctgcgttatctgccgcctcctgctttggaactaaaagcgggccag
gcgaggtcggcatccaaacgctctcagagcactcgcatcgacccagcgccatttgtccag
gtgctcagccttattgaccagcagtatccgaccagcgagcgcggtgacgtgcttatcttc
gtcagcggcgtgaacgaaatcgaatctgttgtggaggccgtccaagagtacgctacggag
cagagtcactggctcgtcctgccgctgcacagtggccaggcgatcgcggagcagggcaag
gtatttgactacgcacccgagggcatgcgcaagtgcattgtgtccaccaacatagccgaa
acgtcgctcacagtggacggcgtgcggttcgtggtcgattctggcaaggtcaaggagatg
agctatgacgccaccagcaagggccagcgcctgaaggagttctgggtgtccaagtcgtct
gcggatcagcgcaagggtcgtgctggccgcacgggaccaggcgtctgctttcggctctac
accgcggagcaatttaacgcttttgaggcctatcccactccggaaatctaccgcgtgccg
ctcgacacgatgctgctgcagatggtgtccatggggctgcccgatgtcagggcctttccc
tttatagaggccccggaaacggagcgcattgagcagaccattctgacgcttaagcaacac
tgcgccctcagcgtggatgagaagttaacaccattgggcagctcgctggccaacttgccg
gtggagctgtccatcggcaagatgttgcttatgggctgtgtgttccccgagatggagcag
ctgctgaccctggccgccatgctaagtgtgcagaacccgctgacgaatcgcgcccacaca
gaccagcgctgcgtacgcgagcgggagtcgctggagtctgatcagggagacatcttcacc
ctggtgcgcctctaccgcgagtgggtgcagcttaagatgcggcgcgatggcacccgtcag
tggtgccgccgcttgggcatcgaggagcagcgattctatgaggtgaccaagctgcgtcaa
cagttccagcgcatcctcgagagctgcggcatggtggtagccagcggttcggactcccag
ctgaccagagccgagcgcgccacgcggcatggtgagctgcgccagctgaaagccatgaag
cgccgccagcgatttgagcaaccccgccagcgcaagttgctcaaacagagcgctggacgg
gcagccgaggacgaggaggaacgggatgaggtacagggcgacgacatgcgagacgtggat
ttccggctgcggctcgatcctcggcagctatcgctgctggagcggtcggcgcgacttgac
cgacaccgcgacgttgtgctactgaagctgctgctcggcagcggattctacccacagttt
gccatcagcgacgagttcaactactgcaagggtggtggccagcagttcttccatacgcgg
ctcaagcccttcctgctgcagcatcccaattcgcacttcgccaagcacttcgagctgctc
aagctggccaacagcgatctgctgcccaagccggacttctacacgcccaagcatccgctc
agcgagcgccaccagttgctctgctatcagtcactgcttgagaccgccaagccctatctg
atcaactgcatccgcctgccggctgctcagacgctattgctcttcagcttcgccatcgac
acgaacgcgggcatcactcagattgcctgcgacgactggctgggactggatctgcccatg
cccggcagcggtatggagcttcttagccgggccattgagttgcgccgacgttggagtagg
ctgctttacgccaagctggacgatctcaacagcaaacaggaagcacattcccattcaagt
gatgataggagcagcgcgctgtggcacgatcttgtggactatatggcgctggacgtggct
tatgcgattcgccgactgctgcccgccgatatcaagaggctctactctcaccaggctcct
tcggcacgactcgcgaagctcaaggagaacccctttgccgtcgactatcccatgactccg
aacgaagaaaagggcggcctcaacgtatcggagcacgtggtatacagctgcttggccgaa
cagaagtggacgacggccatggacgcggctctacgggcagagccatggcagtgcacgcgc
tgcgacttcaagctcgaggagttcgatgtgctggagcagctggtgcatcgaaccaaatgc
aagggccgcaaggcgcagggccgaaagtcgaaaccaactagcacggagatctcaacggag
gcagccgggagctcaagctcccactcctccggcggctattactgcgacacctgcaacaag
gagttgcggatgacaaatatcgacatcttgcgccacaaaaagcagtgccaaagtaacaag
taa
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integrated database retrieval system
