Drosophila erecta: 6550715
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Entry
6550715 CDS
T01060
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
der
Drosophila erecta
Pathway
der03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6550715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
der03041
]
6550715
Enzymes [BR:
der01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
6550715
Spliceosome [BR:
der03041
]
Complex A
U2 snRNP components
U2 related factors
6550715
Complex B
6550715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
Motif
Other DBs
NCBI-GeneID:
6550715
NCBI-ProteinID:
XP_001978097
UniProt:
B3NTM0
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MSKSSGRDRDRERERDRDRERDRERERDRDRERDSRHDSRSRDYDMGKSRNGGAGAGGGG
GGSRNMRDDRKRGKDIISDRGRRDEKRRKRSRSKDYENDNSPHYRRLDKDRDRDRDRQRE
KDREREKDKERERDKDRERDRQREKESDGRRAAAAPPLIIPVPSTSSSDEEVEEIDKEEQ
QRRLEQEMIKRRERIERWRAERKRDTKAAVVVPAVVKTAKKWSLEDESEEDDSNPAPPLD
SGKKDAEPDSPPSKFHSIRKRFDDDMVESKFSPVKRPTFSKSFGKLGIGLATKTEGEIKK
EPSPVDKIKKEPPPGDTKQEIKKELEPAVIAMDIVEEPIVVAEEKSKKAPEQPQVDAQAD
PESEHKSQPKDEPEDDIDPLDAYMQEVNNEMRRVNNFVNPPTKAQGVVILTGVAKKKTTT
LKKGELIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYVE
VPELSRMTAGDVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMDVLRRLGFEKPTPI
QCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSLEDGDGAIAIIMAPTRELC
MQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT
NLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKP
IEVIVGGRSVVCKDVEQNVVILNDDAKFFKLLELLGIYQEAGSIIVFVDKQENADILLRD
LMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPN
HYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRALDLSGTLIPSELQTLWTEYKV
LQEAEGKTVHTGGGFSGKGFKFDEQEFNAVKESKKLQKAALGLADSDDEEDIEQDIDQQI
EQIFAAKRTVKDTSAAATAAAAAAAAAAAAAAAVSGGNPALASAAAQAAAAAAAANMAIA
AASASAASGAPSVAVGGALSSDKLELAKRLASKINSSKNLDTKGSGVAVEPMLKGPHVTG
AAAPLLTARTVAEQMAAKLNNKLNYQPKEDEEGLGPLMGGTTNSFTKYEEELEINDFPQQ
ARWKVTSKEALAQISEYSEAGLTVRGTYVPQGKNPPDGERKLYLAIESCSELAVQKAKRE
ITRLIKEELLKLSSAHHVFNKGRYKVV
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagttccgggcgcgatcgcgacagggagcgcgagcgggatcgggacagggag
cgcgaccgagaacgggagcgcgacagggatcgggagcgggacagccggcacgacagtcgc
agtcgcgactatgacatgggcaagtcgaggaatggaggagccggtgccggcggaggcggt
ggtggctcccggaacatgcgcgatgaccggaagcgcggcaaagacataatcagcgatcgt
ggcagacgcgacgagaagcggaggaagcgttcccggtcaaaggattacgaaaatgacaat
tcgccccattacaggcgtttggacaaggatagagaccgggatcgcgatcggcagcgggag
aaggatcgggagcgcgagaaggacaaggaacgcgagcgggacaaggatcgcgaacgagat
cgccagcgagaaaaggaatcggatggcaggcgagcggccgcagcacctccgctgattata
ccagtgccctcgaccagctcctccgacgaggaggtggaggagatcgacaaggaggagcag
cagcgccgcctggagcaggagatgatcaagcgacgcgagcgaatcgaacgctggcgcgcg
gaacgcaagcgggacaccaaggcggccgtcgtggtgccggcggtggtcaagaccgcaaag
aaatggagtctggaggacgagtccgaggaggacgacagcaatcccgcgccgccgctggac
agtgggaaaaaggacgccgaaccagactcgccgccttccaagttccacagcatacgcaag
cgcttcgacgatgacatggtcgagtcgaagttctcgcccgttaagcgccccacctttagc
aaatcatttggcaaattgggcattggcctggccaccaaaaccgagggggagatcaagaag
gagccatcgcctgtggacaagatcaagaaggagccaccgccgggggacaccaaacaggag
atcaaaaaggagctcgaaccagccgtgatcgcaatggatatcgttgaggagcccatcgtc
gtagcagaggagaagagcaaaaaggcaccggaacagccgcaagtggatgcccaagcggac
ccggaatcggaacacaagtcgcaacccaaggacgagccagaagacgacattgatccactg
gatgcctacatgcaggaggtcaacaacgagatgcggcgtgttaacaatttcgtcaatcca
cccaccaaagcgcagggtgtcgtcatcctcacaggagtggccaaaaagaagacgacgacg
ttgaagaagggcgagttgattgaacaaaacatggacagcttggaatactccagtgaggac
gaactggaggacatacgtgacacggccgttaatctggcgatgaagcaccgcaaggagctg
gccaagatcgatcattcctcggttacatatgcgcccttccgcaaaaacttctatgtcgag
gtgccggaactgagtcgcatgaccgccggcgatgtggagaagtaccgctccgaccttgag
ggcatccaggtgaagggcaaaggctgtccaaagcccattaagacgtgggcgcagtgcggc
gttagcaagaaagagatggacgtgctgcgacggctgggcttcgagaagcccacgcccatc
cagtgccaggccataccggccatcatgtccggacgggatctgataggtattgctaaaact
ggcagtggcaagacgttggcattcattttaccaatgtttaggcacattctggaccagccg
agtctggaggatggcgacggcgctatcgcgatcataatggcgcccacgcgcgaactctgc
atgcagatcggcaaggacatccgcaagtttagcaagtcgctgggcctgcggccagtttgt
gtttacggcggcaccgggatctccgaacagatagccgagctgaagcgcggcgccgagata
attgtgtgcacgccgggtcgcatgatcgacatgctggcggcgaattccggacgtgtgacg
aacctgcgtcgcgtcacttatgttgtcttggacgaggcagatcgcatgttcgacatgggc
ttcgagccgcaggtgatgcggatcatcgacaacgtgcgaccggatcgccagacggtcatg
ttcagcgccacgtttccacggcaaatggaggcgctggccaggcgcatcctcaagaagccc
atcgaggtgatcgtcggcggtcggtcggtggtgtgcaaagatgtcgaacagaatgtggtc
attctcaacgacgatgccaagttcttcaagctgttggagctgctgggcatctaccaggag
gcgggcagcatcattgtgtttgtcgacaagcaggagaacgccgacatcctgctgcgcgac
ctcatgaaggcatcgtatccctgcatgagcctgcacggcggcatcgatcagttcgaccgc
gactccaccatcatcgacttcaagtcgggcaaggtgagactgttgattgccacctcggtg
gcggcgcgcggcctggatgttaaggatctcatactggtggtcaactacgatgtgcccaat
cactacgaggactatgttcacagatgtggtcgcaccggacgagcgggcaaaaaaggcagc
gcctacacgttcatcacaccggaacaatcgcgctatgccggcgacatcattcgcgccctc
gacctatcaggcacactgattccctccgagctgcagacgctgtggacagagtacaaggtg
ctccaggaggccgagggcaagacggtgcacacgggcggcggtttcagcggcaagggcttc
aagttcgacgagcaggagttcaatgccgtcaaggagagcaagaagctgcagaaggcggcc
ttgggactggccgattccgatgacgaggaggacatcgagcaggacattgaccagcaaatt
gagcaaatctttgcggccaagcgaacggttaaggatacctcagccgcggccaccgctgcg
gcggcggctgctgcggcggcagctgctgctgctgctgcagtttctggaggcaatccggca
ctggcctcggcggcggctcaagcggcggcagctgctgctgctgccaatatggccattgct
gcggcctcggcttccgcagccagtggagctccaagtgtggctgtgggcggtgctctaagc
tccgacaaactggagctggccaagcgactcgcctccaagatcaacagcagcaagaatctg
gacaccaagggcagcggggttgccgtggaacccatgctcaagggaccgcatgtcacggga
gccgccgcacccctgctgaccgctcgcacggtggccgagcagatggccgccaaattgaac
aacaagctgaactaccagcccaaggaggatgaggaaggactggggccgctgatgggcggc
acaaccaactcgtttaccaaatacgaggaggagctggagatcaacgatttcccgcagcag
gcgcgctggaaggtcacgtccaaggaggcactcgctcagatttccgagtactcggaggct
ggtctcaccgtgcgcggcacgtacgtgccgcagggcaagaatccgccagatggcgagcgt
aaactctacctggccatcgagagctgcagcgaactagccgtgcagaaggccaagcgggag
atcacgcggctcatcaaggaggagctgctcaagctcagctccgcccatcacgtcttcaac
aagggtcgctacaaggtggtctag
DBGET
integrated database retrieval system
