Drosophila erecta: 6550717
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Entry
6550717 CDS
T01060
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
der
Drosophila erecta
Brite
KEGG Orthology (KO) [BR:
der00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
der01009
]
6550717
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
der03019
]
6550717
04131 Membrane trafficking [BR:
der04131
]
6550717
03036 Chromosome and associated proteins [BR:
der03036
]
6550717
Enzymes [BR:
der01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
6550717
Protein phosphatases and associated proteins [BR:
der01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
6550717
Messenger RNA biogenesis [BR:
der03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
6550717
Membrane trafficking [BR:
der04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
6550717
Chromosome and associated proteins [BR:
der03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
6550717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
6550717
NCBI-ProteinID:
XP_001978099
UniProt:
B3NTM2
LinkDB
All DBs
Position
Unknown
AA seq
1130 aa
AA seq
DB search
MSPPIVTRRSAQQAKIQTRAMASKSKAGTAVAATAAGVISAGSSGGGSGGFNAADPRKTN
KPNAALLEAKRRARNNMLKNQGSGSHECVTDIFQNAVNCKGLVRKPTALIYDESMSHHCC
LWDKEHYECPERFTRVLERCRELNLPERCLELPSRSATKDEILRLHTEEHFERLKETSGI
RDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAM
KAEYNGYCFFNNVALAAQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRF
EHGSFWPHLQESDYHAIGAGAGTGYNFNVPLNALGMTNGDYLAIFQQLLLPVALEFQPEL
IIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADARVAVVLEGGYCLDSLAEGAALT
LRSLLGDPCPPLVEPVPLPRAELAQALLSCIAVHRPHWRCLQLQQTYDCEELQDRDKGQD
LHKVLRQWIGGPPPMDRYPTRDTAIPLPAEQVARNAARLQVLRTETKLSVPSVRVCYAYD
AQMLLHCNLNDTGHPEQPTRIQQIHKMHGEYALLPRMKQLSARAATTDEVCLAHTRAHVN
TVRRLLGREPEDLHGAAAIYNSVYLHPRTFDCATLAAGSVLQAVDSVLRGESRSGICNVR
PPGHHAEQDQPHGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVL
YMSLHRYEHGAFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLVMPIA
YEFNPQLVLVSAGFDAAIGDPLGGCKVTPEGYGMLTHWLSALASGRIIVCLEGGYNVNSI
SYAMTMCTKTLLGDYVPTPQLGAAALQKPATVAYQSCVESLQQCLQVQRNHWRSLEFVGR
RLPSYPVVGENNNEDFLTASLRHLNISSDDAPGAAGGPAGDQPDCGDERPSGSKPKVKVK
TLTDYLAENKEALEQSEMFAVYPLKTCPHLRLLRPEEAPQSLDSGAACSVCGSTGENWVC
LGCRLVACGRYMNAHMEQHSVEAQHPLAMSTADLSVWCYACSAYVDHPRLYAYLNALHVH
KFQEPMAWTHGCAWREDGCYAVGPNGRDEDADQDDAVAGSSICLRLERHN
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgcccatagtcacgcgacgtagcgcacagcaggcgaagattcagacgcgggca
atggctagtaaatcgaaggcgggcacggcagtggcggcgacggcggcgggagtgataagc
gctggctcttccggcggcggcagcggcggatttaatgccgccgatccgcgaaagacgaac
aaaccgaacgcagcgctcttagaggcgaaacgtcgagcgcggaacaacatgctcaagaac
cagggctctggatcgcatgagtgcgtcacggatatattccaaaatgctgtcaattgcaag
ggtctggtgcggaaacccacggccctgatctacgatgagtccatgagccaccactgctgc
ctgtgggacaaggagcactacgagtgtcctgagcgcttcacacgcgtcctggaacgctgc
cgcgaactaaatctgccggagcgctgcctggagttgccctcgagatcggccaccaaggat
gagattctgcgcctgcacacggaggagcacttcgagcggctgaaggagacctccgggatt
cgcgacgacgagcgcatggaggagctgagctcccgctacgactcaatttacattcatccg
tccacattcgagctctccttgctggcgagtggctccaccatcgagttggtggaccacctg
gtcgccgggaaggcgcagaatggcatggccataatccggccaccgggtcaccatgctatg
aaggccgagtacaatggctattgcttcttcaacaacgtggctctggccgcccagcacgcc
ctcgatgtgcacaagctgcagcgcatcctgatcatcgactacgacgtgcatcatgggcag
ggaacccagcggttcttctacaacgatcccagagtggtttacttctccatccatcgcttc
gagcacggcagcttctggccgcatctgcaagagtcggactaccatgcgattggagctgga
gcgggcacgggatacaacttcaatgtgccgctgaatgcgttgggaatgaccaatggcgat
tacctagccattttccagcagctgctgctgccggtggctctggagttccagccggagctg
atcatcgtgtcggctggttatgatgcggcgctgggctgtccggaaggcgagatggaggta
acaccggcctgctatccgcatctgctgaatccgctgctgcgactggccgatgcccgggtg
gccgtcgtactggagggcggctattgcctggactcgctggccgagggagcggccctgacc
ctgcgctccctattgggtgatccctgcccgccgctggtggagccagtacctctgccgcgt
gcggaactcgcccaggccctgctcagctgcattgccgtgcaccgaccgcactggcggtgt
ctgcagctccagcagacctacgattgcgaggagttgcaggaccgggataagggacaggat
ctgcacaaggtgctgcgccaatggattggcggaccaccgccgatggatcgttatccaacg
cgcgatacggccattccgttgccagcggaacaggtggccaggaatgcggctcggctgcag
gtgctgcgcacggagaccaagctatcggtgccatcggtgagggtgtgctatgcctacgat
gctcagatgctgctgcactgcaatctgaacgatacggggcatccggagcagccgacgcgc
atccagcaaatccacaagatgcacggcgagtacgctctgctgccgcggatgaagcaactg
tccgccagagcggccaccacggacgaggtgtgtctggcccacacacgtgcccatgtgaat
acagtgcgtcgattgctgggccgcgagccggaggatctgcatggcgctgctgcgatctac
aactcggtgtacctgcatccgcgcaccttcgattgcgccaccctggccgccggatccgtg
ctgcaggcggtggacagtgtgctgcgtggcgaatcccgcagcggcatctgcaacgtccga
ccgccgggccatcatgccgagcaggatcagccgcacgggttctgcatcttcaacaatgtg
gccattgcggcgcagtatgccattcgggatttcggtctggaacgggtactgatcgtggac
tgggacgtccatcacggcaatgggacgcagcacatcttcgagtccaatcccaaggtgctc
tacatgagcttgcatcgctacgagcacggcgccttcttccccaagggacccgatggcaac
ttcgatgtggtgggcaagggagccggcaggggcttcaatgtgaacataccctggaacaag
aagggcatgggtgacctggagtatgcgctggccttccagcagctggtcatgcccattgcg
tacgagttcaatccccagctggtgctggtatccgccggatttgatgctgccatcggcgat
cccttgggcggatgcaaggtgacgcccgagggttacggcatgctcacccactggctgtcc
gccttggccagcggtcggataatcgtctgcctggagggcggatacaacgtgaactccatt
tcgtacgcgatgacgatgtgcaccaagacgctgctgggtgattacgtgccgacgccccag
ctgggagccgctgcgctgcagaagccggccacggtggcctaccagagctgtgtggaatcg
ctgcagcagtgcctgcaggtgcagcgcaaccactggcgctcgctggagtttgtcggacgg
cggctgccgagctatcccgtcgtgggcgagaacaacaacgaggattttcttaccgcctcc
ttgcgacacttgaatatctcaagtgacgatgctccgggagcggcgggcggacccgccggt
gatcagcccgactgcggcgatgagcggccaagcgggagcaagcccaaagtcaaggtaaaa
acgcttaccgattacttggcggagaacaaggaggccctcgagcagagtgagatgttcgcc
gtgtatccgctcaagacgtgtccgcacttgaggctcctgcgcccggaggaggcgccccaa
tcactagacagcggagcggcgtgcagcgtttgcggatcgacgggggagaactgggtgtgc
ctgggctgccgtctggtggcctgtggtcgctatatgaacgcccacatggagcagcactcg
gtggaggcgcagcatccgctggcaatgagcacggccgacctgtccgtgtggtgttacgcg
tgctcggcgtacgtggaccatccccgcctgtatgcctacctgaatgcgctgcacgtgcac
aagttccaggagccgatggcctggacacatggctgtgcgtggcgcgaggatggctgctat
gcggtgggacccaatgggcgagacgaggacgcggatcaggatgatgccgtcgccgggagc
agcatctgcctgcgcctggagcgccacaactga
DBGET
integrated database retrieval system
