Drosophila erecta: 6551735
Help
Entry
6551735 CDS
T01060
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
der
Drosophila erecta
Pathway
der03013
Nucleocytoplasmic transport
der03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6551735
03015 mRNA surveillance pathway
6551735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
der03019
]
6551735
Messenger RNA biogenesis [BR:
der03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
6551735
mRNA cycle factors
P-body specific factors
6551735
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
6551735
NCBI-ProteinID:
XP_026837370
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MLANDSAATDPLEAAEASSITNDVSTPPVSRKDSTEDVDEGDNDNVNDNVNDNANDVDDT
DGNADVDAAAASALEAEEREELLQFINELRDKIESKRQLRLQNSTFKLPGEEYFAKLDSN
LKKNTAFVKKLKLFTATQLDVLMRELSALNLSKYISEICAALAEAKLKMTDVPAVVTLAS
RLHCTYADFDVQFLEAWQKALNIKATEKIGNPSKLRVDLRLFAELVSSGVIQMKPGLAQL
GVVLVHLIAQDKDDHSNFSIILSFCRHCGEEYAGLVPQKMQQLATKYGVEVPKSDFLTAD
KQLNLRTMLKDYFKALCKHVLAEQGELMNMTKNIRRTMECKGEISTEKREKCELMQAGFD
KLLASAQSLSELLGEPLPELAKESECCNPGTVIDNMLDSASFGVLDPWGDEETRSFYTDL
PDLRQFLPNFSAPKVDLETLEEPSELTEEAIEANLDAEMDLDDPPSTTSDSALENPSEEQ
LTTSVTPAEDVKPQKMGNALMELGRQQQSQLNQNPTQTQNQMRQQFDVFLVNLFNCVNKE
LIDSAAIEFLLNFNTKHQRKKLTRTIFSVQRTRLDILPYLSRFVAIVHMCNTDVAADLAE
LLRKEFKWHIHKKNQLNIESKLKIVRFIGELVKFGLFKKFDALGCLKMLLRDFQHHQIEM
ACAFVEVSGVYLYNCRDARLLMNVFLDQMLRLKTATAMDSRHASQIESVYYLVKPPESSK
REPAVRPPMHEYIRHLIFEELCKQNVERCIKMLRRIDWQDPETNCYAIKCLSKAYLLRFP
LVRCLADLVSGLSSYQPRAVTIVIDNVFEDIRAGLEIHSPRMAQRRIAMAKYLGEMYNYK
LVESTHILNTLYSIISLGVSMDQNVISPLDPPDSLFRLKLACMLLDTCGPYFTSQATRKK
LDYFLVFFQHYYWFKKSHPVFSKAENTSDLFPILVDHTYRDCLASVRPKLKLYKSLDQAK
AAIDQLQEKLYPQLKAANNAQDPSLATISELSELDEGVTDEDSGSSNDQRERQVAGQEQE
QSNDWTENETEPPLPQPPPPEKSKEDLEFEHLYDKMTTDSYQERLKEPIKATAKDIPVPM
MARLQKKSYEQITGAQASGTGNNNTSQISKAVANQDATPGSPGPDLPDGNVKSGGGAGGS
VAAAGTAAVPFVLMVRGNKGGKQQFKSFVAPSDSHLAINLKRQEQKIREEKEKVKRLTLN
ITERIEEEDYQESLLPPQQRNFTQSYYQKPNKHKFKHQKGAPDADLIFH
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgctagccaacgattccgcggcgacagatcctctggaagcggccgaggcgagcagcata
acaaacgatgtgtccacaccgccggtgtcgagaaaagattcgacggaggatgttgacgag
ggtgacaacgacaacgtcaacgacaacgtcaacgacaacgccaacgacgtcgacgacacg
gacggaaatgcggatgtggatgcggctgcagccagtgctctggaggccgaggagcgcgag
gagctgttgcagttcataaacgagctgcgcgacaagatcgagagcaagcgacagctgcgg
ctccagaactccacattcaagctgcccggtgaggagtacttcgccaaactggactccaat
ctcaaaaagaacacggctttcgtcaagaaacttaagcttttcacggccacacaactggac
gtactgatgcgtgagctatccgctctaaatctgagcaaatacatctctgaaatatgcgcg
gccctggccgaggccaagttgaagatgacggatgtgccggcggtggtgactctggcatcc
cggctgcactgcacatatgccgacttcgatgtccagtttctggaggcctggcaaaaggcc
ctgaacatcaaggcaaccgagaagattggcaatccgagcaaattacgtgtggaccttcgc
ttgtttgccgaactagtcagctctggtgtgatccaaatgaagcccggattggcccaactc
ggtgttgtcctggtacacctgattgcccaggacaaggatgaccacagtaacttctcaatc
atcctctctttctgccggcactgtggcgaggagtacgccggtctagtgccgcaaaagatg
caacagttggccaccaaatacggagtggaggtgccgaaatccgacttcctgacagccgac
aagcagcttaatctgcgcaccatgctcaaggattacttcaaggccctgtgcaagcatgtt
ctggccgagcagggcgagcttatgaacatgaccaagaacatacggcgcacaatggagtgc
aagggtgagatatccacggaaaagcgggagaagtgtgaactgatgcaagccggtttcgat
aagctgctggcctccgcccaatcgctgtcggaactgctgggtgaaccactgcccgagttg
gccaaggagtctgagtgctgtaatccgggcacagtcatcgacaatatgctggacagtgcc
tccttcggagtgctcgatccgtggggcgacgaggagacccgctccttctacacagatctg
cccgatttgaggcagtttctgcccaacttttcggcacccaaagtcgatttggaaacgtta
gaggagcccagtgaacttactgaagaagcgatcgaagccaatctggatgccgaaatggat
ctagacgatccaccgtccaccacctcggattctgctctggaaaatcccagtgaagagcag
ctaaccacatcagttacccctgcggaggatgtaaagccgcagaagatgggtaacgctcta
atggaactgggacgccagcagcaaagtcagctcaatcagaatccgacccaaacccaaaac
cagatgcgtcaacagttcgacgtcttcctggtcaacctattcaactgtgtgaacaaggag
ctgatcgattcggcggccatcgagtttttgctaaacttcaacactaagcatcaacgcaag
aaactgacccgaacgatattttcggtgcagcgaacgcgtctggatatcctgccctatctc
tcccgctttgtggcaattgtgcatatgtgtaatactgacgtggctgccgatttggcagaa
ctgctacgcaaggagttcaagtggcacattcacaagaagaaccaactgaatattgagtcg
aagcttaagatcgtgcgattcataggcgaactggttaagtttgggttgtttaagaagttc
gatgccttaggatgtctgaaaatgttactgagggactttcagcatcaccaaatcgagatg
gcctgtgcctttgtggaagtcagcggcgtgtatctgtacaattgccgggatgcccgtctg
ctaatgaatgtgtttctggaccaaatgctgcgcctgaagacagcaacggcaatggactcg
cgacatgcgtcccagattgagagcgtctactatctggtgaagccgccggagtcgtcgaag
cgcgagcccgcggttcgaccacccatgcatgagtacatccgtcacctgatcttcgaggag
ctttgcaaacagaacgttgagcgctgtatcaagatgctgcgccgcatcgactggcaggat
ccggagacaaattgttatgccattaagtgcctcagcaaggcgtacctgctgcgctttccg
ctcgtccgctgcctagccgatctcgtttccggactgagctcctatcagccgcgagcggtt
accatcgtgatcgataatgtgtttgaggatatacgcgccggccttgagatccattcgcca
cgcatggcccagcggcgcatagcgatggccaagtacctgggcgaaatgtacaactacaag
cttgtggagtccactcatattcttaatacgctgtactctatcatctcgctgggcgtatcc
atggatcaaaatgtcatctcgccgctggatccgcccgatagcctgttccgactgaagctt
gcctgtatgctactggacacgtgtgggccctacttcaccagccaggccacgcgaaaaaaa
ctggactacttcctggtcttcttccaacactactattggttcaagaaatcccatcccgtg
ttcagcaaggcagagaacacctccgatttgttccccatactggtggatcacacctatagg
gactgcctagccagtgtgcggcccaagctgaagctgtataagagtctagatcaggccaag
gcggcgattgatcagctgcaggagaagctctatccccaactaaaggccgccaataatgct
caggatccgtcgctggccacaatcagtgaacttagcgagctagatgagggcgtcactgat
gaggactcggggtcgtcgaatgatcagcgggagcgacaggtggctggtcaagagcaggag
cagagcaacgactggacggagaacgagacggagccaccgctgccgcaacccccgccgcca
gaaaagtctaaggaggacctggagttcgaacacttgtacgataaaatgaccacagactcg
taccaagaacggcttaaggagccgatcaaagctacggccaaggacatacctgtgccgatg
atggcgcgcctgcaaaaaaagtcttacgagcagataacgggggctcaggcatccggcact
gggaacaacaatacgtcacagatctcaaaggcggtcgccaatcaggacgcgacgcccggc
tctccaggtccagatctgccagatggcaatgtcaagtccggcggcggtgcaggaggtagc
gttgctgctgccggcactgcagctgtgccctttgtgctgatggtgcgcggcaacaagggt
ggtaagcagcaatttaagtcgttcgtggcgccatcagactcgcacctggccatcaacctg
aaacggcaggagcagaagatacgcgaggagaaggagaaggtcaagcgcctcacgcttaac
ataaccgaacgaatcgaggaggaggactaccaggagtcgctgctgccgccgcagcaacga
aactttacccagagctactaccagaagcccaataagcacaagttcaagcaccaaaagggt
gcgcccgatgcggacctcatctttcactga
DBGET
integrated database retrieval system
