Drosophila erecta: 6552408
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Entry
6552408 CDS
T01060
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
der
Drosophila erecta
Pathway
der03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6552408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
der03019
]
6552408
Messenger RNA biogenesis [BR:
der03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
6552408
mRNA degradation factors
5'-3' decay
Decapping complex
6552408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
6552408
NCBI-ProteinID:
XP_001979806
UniProt:
B3P3I4
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MDDSFFGFDTNLPDEDGGDGRIVEAEYDALNDETFGSAINGDWEEAHETMVRLGGNGERV
RKRPAESSGNTDFADHGNGAFLRHGNPLSSAPSSSGSTPAPLNAPFRQSRHIDDSDLELN
ISSMKLDDMDLSSFTNDSEAGGLSNRIKLDSGVWGSQPFPNNQNLFREPMRSAFKPQQQQ
QQPHHQHHLQQIKPPQEANANFALTPQAFPKITTLEDIERNMIIQQAMPKQQQQSQQQAE
RKMFDDFSLGNRQQVPTPTMLQQQILQQQHQQKQQPQQQPPQQPQQQPPQQAQHMAPPGF
LGTPQTSPPRPNLGFPGPHPLPELLPTPPSQQQLNGIGGNRVPPGFIYPPGLPGNIPQLP
QHPLMQQHMPPNFPLPGGNQRPLPNPHALPTALNNFAMHPSFNAMRAAGLHPAAFMQPPH
PHQMQPPRMPPHPLQAASSLLGQQPPNSMYNMFNMRLVQEIQQNHPLLQQAAVVRQMQQS
RAGSVTSDRQRTQTQQQQQGRRPDGTGNYPLEEYDEYANLMSTRDKHWLIGIQLSQLNTD
TPYIDDYYYTVFRERKAQQNGQMRNSQAHKDNQLNHPLTQPRGHAQLILVQLGNKNGTRN
GHGRERRNSENANSTSGNTNNGSGGNNNNLTGYLFSPLKFENSLGKLQYGSVTAPRKIID
ADIMSGESITSPDANATSSSTSSTPLPTSASHDVNPSSMRKSRHILLLIETLYRYLLKLE
DLESPEVMATIELKKKKEAERIAALEQLEMANKTPEERAAEAANPQTMNPQLKNKFNYEV
ETKAALVNKLKAGLAFDKVIAMMNVRKGKILIRRIMPFIADQNIRWIVWSGVFCSLQTVV
KKDKDDVEGVLYALYPEFKKHVNTATFELLVSISSAITLNDKKLAGIFCSRFGILSLVAL
ILRAEEIYVSRTDATLSEENKQKWREFLAQVASCLNRTIQTQTISAAIESDAIQPLMNHF
ERFKDLKLDALLALITEARHQID
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggatgactcttttttcggctttgacacgaatctaccggacgaagatggtggcgatgga
cgcatcgtcgaggcggaatacgatgccctcaatgacgaaacctttggatctgcgataaat
ggcgactgggaggaagcccatgagacgatggtgcgcctgggcgggaatggcgaaagggtg
cggaagcgacccgcggaatctagtggaaatacggattttgccgatcacggcaatggtgcc
ttcctgcgacacggtaatccgctatcatcggcgccctcttcgagcggctccactccagcc
cctttgaatgcccccttccgacagtctcggcacatagacgactcggatctggagctgaac
atttcctcaatgaagttggacgacatggacctatcctcgtttaccaacgatagcgaagcc
ggtggcttgagcaaccgcatcaagctggactccggagtctggggatcacagccgtttccc
aacaaccaaaatttgttccgcgagcctatgcgcagcgccttcaagccacagcagcaacaa
caacagccacatcatcagcaccacttacaacagataaagcccccacaggaagcgaatgcc
aattttgcactgactccacaggcttttcccaaaattacaactctcgaggacatagaacgc
aatatgatcattcagcaggccatgccaaaacaacagcagcagagtcagcaacaggcggaa
cgcaaaatgttcgatgattttagtctgggtaacaggcagcaggtgcctacaccaaccatg
ttgcagcaacagatattacagcagcagcatcaacagaaacaacagcctcagcagcagccg
ccacaacagccgcagcagcaaccgccacaacaagcgcagcacatggcaccccctggcttc
ttaggcactccacagacctctccaccgaggccaaatttgggatttcctggaccccatcca
ctgcctgagctactgcctacaccgccgtcgcagcaacagctgaacggcattggtggcaac
cgagtgccgcccggatttatttacccgccaggtctgcccgggaatattccgcaattgccc
cagcatccgctgatgcagcaacacatgccgccaaactttccactgcccggcggcaaccag
cgacctctacccaatccacacgctttgcccacggccctcaacaattttgcgatgcatccg
agcttcaatgcgatgcgcgccgctgggctgcatccagccgcgtttatgcaaccaccccat
ccgcaccagatgcagccaccgcgaatgccgccgcacccactgcaagctgcctcaagtcta
ttaggtcagcagccaccgaactccatgtacaacatgtttaacatgcgactagtgcaagag
atccagcagaaccatccgctgcttcaacaggcggccgtggtacgccaaatgcagcaaagc
agagccggatccgtgaccagcgatcgccagaggacgcagacgcaacagcagcaacaagga
cgacgtcctgatggtacagggaattacccgctggaagagtacgatgaatatgccaaccta
atgagcacgcgcgacaagcactggctaattggaatccagctttcgcagctgaacacggac
acgccgtatatcgacgactactactacacggtgttcagggagcgcaaggcccaacagaac
ggccagatgcgcaacagtcaggcgcacaaggacaaccagctgaatcatccgcttactcag
ccacgcggtcatgcgcagcttattctcgtgcagttgggcaacaagaatggtactcgcaat
ggacacggacgtgagcgccgcaactcggagaacgccaacagcacgtcaggcaacacgaac
aatgggtcaggtggtaacaacaacaacctgacaggctatttattctcacctcttaagttt
gagaactcactgggaaagctgcagtacggaagtgtgacagcaccgcgaaaaattatcgat
gctgacattatgagtggggaatcaattacctctcctgatgccaacgcaacatcttcatca
acgagctcgactccgctgcccacctccgcgagccatgatgtaaaccccagcagcatgcgc
aagtcgcgtcacattctgcttctgattgaaacgctgtatcgctatctgctgaagttggag
gatttggaaagccccgaggtgatggccaccattgagctgaagaagaaaaaggaagccgaa
aggatcgcagcccttgagcagctggaaatggccaataaaacgcccgaagagcgggctgcc
gaagccgccaatccgcaaaccatgaatccgcaactaaagaacaagttcaactatgaggta
gagacgaaagctgcgttggtcaataaattaaaggcaggactggctttcgacaaggtgatc
gccatgatgaatgtgcgcaagggaaagatacttattcgacgcattatgccctttattgcg
gatcaaaacattcgctggatcgtatggagcggcgtcttctgttccctacaaacagtggtg
aaaaaggacaaggacgacgttgaaggcgtattgtacgctctttacccagagtttaaaaaa
cacgtcaacacagctactttcgaactcctagtgagcatttcatctgctattacgctgaat
gacaagaaactggctggaatcttctgcagtcggtttggaatcctttcgttggttgccctc
atacttcgcgccgaggaaatctacgtttcgcgaactgacgctactctcagcgaggagaac
aagcaaaagtggcgcgaatttctggcacaggttgcatcctgcctcaatcgcactattcaa
acccagaccatttcggcagccattgagtcggatgcaattcagccgcttatgaaccatttt
gaacggtttaaagatcttaaactggatgccctcttagcattaataacagaagccaggcat
caaattgattag
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