Drosophila erecta: 6555351
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Entry
6555351 CDS
T01060
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
der
Drosophila erecta
Brite
KEGG Orthology (KO) [BR:
der00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
der03041
]
6555351
Spliceosome [BR:
der03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
6555351
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
ARM_TT21_5th
TPR_19
PCC_BT
DUF5683
Motif
Other DBs
NCBI-GeneID:
6555351
NCBI-ProteinID:
XP_001981431
UniProt:
B3P5Q1
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MASEGENVVMESPGRRTRSGRKAASPAATLPTRSTRRTSKRNVQLSDHEEEAEDQVAMVQ
DEEEPFAGTTTEEAPALESQFEETQHQIEDDVEMLMPAETAGVDEKSSSFPFGTVAEQHS
ETSDDIKETRGQAGVDTLLASMAGDNANSLPSVGGNDESDNAKKADFEYNVEALQPQAEK
LNSSEDSSSQHAIAEDLADADTSNATIVNTEIVSEDELPLPSKPEINDAEEVSDEELPAP
QRAELPADAEVISEDELPTHNNNNTASEPKAVKRKAEDEIIKSTEDKEASSLEASAKDKS
AEQYNPGSPTSESNDAQPSEKKFKVEESEPKEKKKEKERDKDKDKEKDKDKEKDKEKERK
KLPDLDKYWRAVKDDSTDFTGWTYLLQYVDSESDAEAAREAYDTFLSHYPYCYGYWRKYA
DYEKRKGIKANCYKVFERGLEAIPLSVDLWIHYLMHVKSHHGEDEQFIRSQYERAVKACG
LEFRSDKLWDAYIRWENESKRYHRVVQIYDRLLAIPTQGYNGHFDNFQDLINQHAITSTL
ANEELVRLRKDFHERHQSKSSKSSSKHRRDSSSSSKDKDSKERGEREKDKDKEKRESGGG
GAGKSPKDTSETQVDESDSTTDLTTESESSPAASKPALQIDFSDLSTLNDEEVASIRDRA
ISARRKVHKLTVSAVTARWSFEEGIKRPYFHVKPLERAQLKNWKDYLDFEIEKGDRERVL
VLFERCLIACALYDEFWLKMLRYLESLEDQSGVVDLVRDVYRRACRIHHPDKPSLHLMWA
AFEECQMNFDAAAEILQRIEQRCPNLLQLSYRRINVERRRGALDKCRELYKHYIESTKNK
GIAGSLAIKYARFLNKICHDLDAGLAALQQALERDPANTRVALQMIDLCLQRSKVDEQEV
IQIMDKFMGRADIETDQKVLFAQRKVEFLEDFGSTARGLQDAQRALQQALSKANEAQKKS
DGSPSRKNSSSSKEGPVPSGSSTTAYNNGGPAAAVAGYNYGAANPYYGQQNAAAAYPPQA
PQQTSYDSYYNQWGYGSGGASASSGGGYNYSQWSGYGNYY
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagaaggcgaaaacgttgtgatggaaagtccaggtcgccgcacacgttctggt
cggaaagccgcatctccggctgcaacgctaccaacgagaagcacccgtcgcacatccaag
cggaacgtacagctaagtgaccacgaagaggaggccgaagatcaagtggccatggttcag
gacgaggaggagccctttgcagggacgaccaccgaggaggcacctgctttagagtcccag
ttcgaggagacacagcaccagatagaggatgacgtggaaatgctaatgccagccgagact
gcaggtgtcgatgaaaagagctcttcctttccatttggcacggtggcggagcagcattca
gagactagtgatgatattaaggagacacgcggacaggctggcgtggacaccctactggct
tctatggccggcgataatgccaacagcttgccctccgtgggtggaaatgatgagagtgac
aatgccaagaaggcggactttgagtacaatgtagaggccctgcagccgcaagcagagaaa
ctgaattcctctgaggactccagctcacaacatgctattgccgaggatctggccgatgcg
gacaccagcaatgccaccattgtcaacacagagatagtctctgaggatgaactacctctg
cccagcaagccagaaataaacgatgccgaggaagtatccgacgaagaacttccagccccg
cagcgggctgagttgccagcggatgctgaagtaatctctgaggacgagctgcctacccac
aataacaataacaccgccagtgagcccaaggcagtgaagcgcaaggcggaagacgaaatc
attaagagcaccgaagataaggaagcaagcagtcttgaagcaagcgcaaaagataagtcc
gcagagcaatataatccgggcagtccaacatctgagagcaacgatgcacagccctctgag
aaaaaattcaaagtggaagaatcggaacccaaggagaaaaagaaggaaaaggaacgcgat
aaagacaaagataaggagaaggataaggacaaagagaaagataaggaaaaggagcgtaag
aagctgccggacctagataagtactggagagctgtcaaggatgactccaccgacttcacc
ggctggacgtacttgctgcaatatgtggacagtgagtccgatgcggaagcggctcgcgag
gcctacgatacattcctgtcccactatccctactgttacggatattggcgcaagtacgcc
gactacgagaaacgcaagggcatcaaggcgaactgctacaaggtgtttgagcgtggacta
gaggcgattccgctgtcagtggatctgtggatccactacctgatgcacgttaagtcccat
catggagaggatgagcaatttattcgctcccagtacgaaagggcagtgaaggcatgcggc
ctggagttccgctcggacaaactctgggacgcctacattcgctgggaaaacgagtcaaag
cggtaccatcgtgtggtccagatctacgatagacttttggccatacccacacagggctat
aatggccatttcgacaatttccaagatttgatcaatcagcatgctataactagtacactt
gcaaacgaggagctggtccgtctgcgcaaagacttccacgagcgtcaccagagcaagtcc
tccaagtcctcgtccaagcatcgacgggacagtagtagcagctccaaggacaaggactca
aaagagcgaggcgaacgggagaaggacaaagacaaggagaagcgagaatctggcggaggc
ggtgctggtaagtcgccaaaagatactagtgaaactcaagtcgatgaatcagatagtact
accgatctgaccactgaaagcgagtcatcgcctgcagcttcaaaaccggcgctgcagatc
gatttcagtgatcttagcacgttgaatgacgaagaggtggccagcattagggacagggcg
atctcggcgcggcgcaaagtccacaagctgaccgtgagcgcagtgacagcccgctggtcc
ttcgaggaaggcatcaagcggccttacttccatgtgaagcccctagagagggcacagctc
aagaattggaaggactacctggacttcgagatcgaaaagggtgatcgcgagcgcgtcctg
gttttgttcgaaaggtgcctaatcgcctgtgcattgtatgacgagttctggctgaagatg
cttcgttatctagagtctttggaggatcagagcggagttgtggacctggtacgcgatgtt
taccgccgtgcctgccgcatccatcatccggacaaacccagtctgcacctgatgtgggcc
gccttcgaggaatgccagatgaactttgacgccgccgccgaaattttgcagcgcatcgag
cagcgttgccccaatcttctgcagctttcctaccgccgcatcaacgtggagagacgtcga
ggagcgctggacaagtgtcgcgaactgtacaagcactatatagagagtacaaagaacaag
ggcattgccggcagtctggccatcaagtacgcccgtttcctcaataaaatctgtcatgat
ctcgacgcgggcttggccgccctgcaacaggcgctggaacgtgatccggccaacactcgt
gtggctctgcaaatgatcgatttgtgccttcagcgctcaaaagttgatgagcaggaggta
atccaaattatggataagttcatgggacgcgcggacattgaaaccgatcagaaggtattg
tttgcccagcgcaaagtggagttccttgaggatttcggcagcacggccaggggtctacaa
gatgcacagcgcgctctacagcaggcactcagtaaagctaacgaagcgcaaaagaagagt
gatggcagtcctagtcgcaaaaactcatcaagcagcaaagaaggtcctgtcccctcagga
tcctcgacgacagcttacaacaatggtggcccggccgcggcagtcgctggctacaattat
ggagcagcgaatccatactacggccagcagaatgccgctgcagcctatcccccgcaggca
ccacaacagacgtcctatgactcttactacaatcaatggggatatggttccggtggggcc
agcgccagcagtggtggcggctacaactatagccagtggagcggctatggcaactactat
tga
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