Dermacoccus sp. PAMC28757: H7F30_00180
Help
Entry
H7F30_00180 CDS
T08446
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
derm
Dermacoccus sp. PAMC28757
Pathway
derm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
derm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H7F30_00180 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
derm03400
]
H7F30_00180 (xth)
Enzymes [BR:
derm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
H7F30_00180 (xth)
DNA repair and recombination proteins [BR:
derm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
H7F30_00180 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QNK52815
LinkDB
All DBs
Position
39834..40622
Genome browser
AA seq
262 aa
AA seq
DB search
MRIATWNVNSIRTRVDRVVAFLERHDVDVLAMQETKCKDEQFPMARFEEAGYEVAHHGLN
QWNGVAIASRVGLEDISIGFEDMPGFGDPIAAEARAIGATCGGVRTWSLYVPNGREIDHP
HYSYKLEWLERLRLDGAKWLAEDPLAQIALMGDWNIAPTDEDVWDMGFFEGKTHVTPPER
DAFQAMIDAGFSDVVRPFTPGPGTYTYWDYTQLRFPKKQGMRIDFALCSPALAERVEGAQ
IDRDERKGKGASDHAPVIVDLD
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcgccacgtggaacgtcaactccatccgcacccgcgtcgaccgcgtcgtcgcc
ttcctcgagcgtcacgacgtcgacgtgctcgccatgcaggagacgaagtgcaaggacgag
cagttccccatggcgcgcttcgaagaggccggctacgaggtggcccaccacggcctcaac
cagtggaacggcgtcgccatcgcctcccgcgtcgggctcgaggacatctcgatcggcttc
gaggacatgccgggtttcggtgacccgatcgcggccgaggcccgcgccatcggcgcgacc
tgcggcggcgtgcgcacctggtcgctctacgtgcccaacggccgcgagatcgaccacccg
cactactcctacaaactcgagtggctcgaacggctccgactcgacggtgcgaagtggctc
gccgaggacccgttggcccagatcgcgctcatgggcgactggaacatcgcccccaccgac
gaggacgtgtgggacatgggcttcttcgaaggcaagacccacgtcacaccgcccgagcgg
gacgcgttccaggccatgatcgacgcaggtttcagcgacgtcgtgcgccccttcaccccc
ggcccgggcacctacacgtactgggactacacgcagctccgcttcccgaagaagcagggc
atgcgcatcgacttcgccctgtgctcccccgcgctcgccgaacgcgtcgagggcgcgcag
atcgaccgtgacgagcgcaagggcaagggcgcgagcgaccacgcgcctgtcatcgtcgat
ctcgactga
DBGET
integrated database retrieval system
