Dermacoccus sp. PAMC28757: H7F30_05205
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Entry
H7F30_05205 CDS
T08446
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
derm
Dermacoccus sp. PAMC28757
Brite
KEGG Orthology (KO) [BR:
derm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
derm03032
]
H7F30_05205 (topA)
03400 DNA repair and recombination proteins [BR:
derm03400
]
H7F30_05205 (topA)
Enzymes [BR:
derm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H7F30_05205 (topA)
DNA replication proteins [BR:
derm03032
]
Prokaryotic type
DNA Topoisomerases
H7F30_05205 (topA)
DNA repair and recombination proteins [BR:
derm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H7F30_05205 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QNK53685
LinkDB
All DBs
Position
1071910..1074735
Genome browser
AA seq
941 aa
AA seq
DB search
MSSGRKLVIVESPNKVKNIAAYLGDEYVVDASVGHIRDLPTPSELPADMKKGPYGKFAVD
VDNGFDAYYVVDADKKKKVAELKRALKDADELYLATDEDREGEAIAWHLYETLKPKVPVK
RMVFHEITKEAIQRAANNTRDLDMQMVNAQETRRILDRLYGYEVSPVLWRKVRRGLSAGR
VQSVATRMVVERERERMAFRAASYWDVEGEFEAKAGQSFVAKLSSVDGERVASGRDFGDD
GVLKSKGVRHLDGAAAEKIAESTRSSHASVSAVSEKPYSRKPSAPFITSTLQQEASRKLR
LGSKDTMRVAQRLYENGYITYMRTDSVTLSESAISAARQQARDLYGAEYVPDAPRRYAGK
AKNAQEAHEAIRPAGDRFRTPAQVAGQLRGTEFALYELIWKRTVASQMADAKGSTASVKL
TVPVESSGVAKQAEYSASGTVITFRGFLAAYEEGRDADRYSNDDSERRLPKLSEGVSLDV
LRAEALGHETSPPARFTEATLVKALEERGIGRPSTYAATVGTIQDRGYVRTRGSALIPTW
LAFAVTNLLETHFPSLVDYDFTASMEEGLDRIAAGDEERARWLSRFYFGDEGASAEGLRQ
LVDDLGEIDARGISTIPIGEGYVVRVGRYGPYVEQDVPEGVDPATGEVKDGADAQAAASA
TPRRASITDEIAPDEMTPAKIRELLEAADDDGRVLGQDPESGRDIVAKAGRYGPYVTEVL
ADEAPAADEKPKKKAAKPKPRTASLFKDMDLATIDLETALKLLSLPRVVGVVEEKKTADD
GTEKTEKVEITAQNGRYGPYLKKGTDSRSLETESQLFSITLEEAEAIYAQPKQRGRAAAK
PPLKEFGADPASGKPVVVKDGRFGEYVTDGETNATLRKDDDVETLTAERAFELLAEKRAK
GPTTRKKAAKKSTKKTAKKTTAKTATKKTAAKSAAKTAKKA
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtcaggccgcaaactcgtcatcgtcgagtcgccgaacaaggtcaagaacatcgcc
gcgtacctgggggacgagtacgtcgtcgacgccagcgtcggtcacattcgtgatctgccc
acgccgagcgaactcccggccgacatgaagaaggggccgtacggcaagttcgccgtcgac
gtcgacaacggcttcgacgcgtactacgtcgtcgacgcggacaagaagaagaaggtggcc
gagctcaaacgggccctcaaggacgccgacgagctctacctcgccaccgatgaggaccgc
gagggcgaggccatcgcgtggcacctgtacgagacgctgaagccgaaggtgcccgtcaag
cgcatggtgttccacgagatcaccaaggaagccatccagcgtgccgcgaacaacacgcgc
gacctcgacatgcagatggtcaacgcgcaggagacgcgccgcatcctcgaccgcctctac
ggctacgaggtctcgccggtgctgtggcgcaaggtgcgccgcgggctgtcggcaggtcgt
gtgcaatcggtcgcgacgcgcatggtcgtcgagcgtgagcgcgagcgcatggccttccgc
gcagcgtcctactgggacgtcgagggcgagttcgaggcgaaggccggccagtcgttcgtc
gccaagctcagctccgtcgacggcgagcgcgtggcctccggccgcgacttcggtgacgac
ggtgtgctcaagagcaagggcgtgcgccacctcgacggcgctgccgccgagaagatcgcg
gagtcgacgcgttcgtcgcacgcgagcgtctccgccgtcagcgagaagccgtactcgcgc
aagccgagcgcgccgttcatcacctcgacgctgcagcaggaggcgagccgcaagctgcgc
ctcggctcgaaggacacgatgcgtgtcgcgcagcgtctctacgagaacggctacatcacc
tatatgcgtaccgactcggtgacgctgtcggagtcggccatcagcgctgcgcgccagcag
gcacgcgacctgtacggcgccgagtacgtgccggacgcgccgcgtcgctacgcgggcaag
gcaaagaacgcgcaggaagcccacgaggcgatccgtcccgcgggtgaccgcttccgcacg
ccggcgcaggtggccggccagctgcgcggcaccgagttcgcgctctacgaactcatctgg
aagcgcaccgtcgcctcgcagatggctgacgccaagggctcgacggcttcggtgaagctc
accgtgccggtcgagagctccggcgtggccaagcaggccgagtactcggccagcggcacc
gtcatcaccttccgcggattcctcgccgcgtacgaggaggggcgcgacgccgaccgttac
tccaacgacgactcggagcgtcgcctgccgaagctctccgagggcgtttccctcgacgtg
ctgcgcgccgaagcgctcggccacgagacgtcgccgccggctcgtttcaccgaggccacg
ctcgtcaaggcgctcgaggaacgcggcatcggccgcccctcgacgtacgccgccaccgtc
ggcacgatccaggaccgcggttacgtgcgaacgcgcggcagtgcgctcatcccgacgtgg
ctcgcgttcgccgtcacgaacctgctcgagacgcacttcccgagcctcgtcgactacgac
ttcaccgcctcgatggaggagggcctcgaccgcatcgccgccggtgacgaggagcgcgcc
cgctggctgtcgcgcttctacttcggtgacgaaggcgcatcggccgagggcctgcgtcag
ctcgtcgatgacctcggcgagatcgacgcccgcggcatctcgaccattccgatcggtgag
ggctacgtcgtgcgcgtcggccgttacgggccgtacgtcgagcaggacgtgcccgagggc
gtcgacccggccacgggcgaggtcaaggacggtgcggacgcgcaggccgctgcgtcggcg
acgccgcgccgcgcgtcgatcaccgacgagatcgcgccggacgagatgacgccggcgaag
atccgcgaactgctcgaagcggccgacgatgacggtcgcgtgctcggacaggacccggag
tcgggccgcgacatcgtcgcgaaggccggtcgttacggcccgtacgtcacggaggtgctc
gccgacgaggcccccgccgccgacgagaagccgaagaagaaggctgccaagccgaagccg
cgcacggcgtcgctgttcaaggacatggacctcgcgacgatcgacctcgagaccgcgctc
aagctgctctcgctgccgcgcgtcgtcggcgtcgtcgaggagaagaagacggctgacgac
ggcacggagaagaccgagaaggtcgagatcaccgcgcagaacggccggtacggcccctac
ctcaagaagggcaccgacagccgctcgctcgagacggagtcgcaactgttctccatcacg
ctcgaggaggccgaggcgatctacgcccagccgaagcagcgtggccgcgcggctgcgaag
ccgccgctcaaggagttcggcgccgaccctgcgtcgggcaagccggtcgtcgtcaaggac
ggtcgcttcggtgagtacgtcaccgacggcgagaccaacgcgacgctgcgcaaggacgac
gacgtcgagaccctgacggccgagcgggccttcgaactgctcgccgagaagcgggcgaag
gggccgacgacgcgcaagaaggcagcgaagaagtcgaccaagaagaccgccaagaagacg
acggcgaagacggccacgaagaagacggccgccaagagcgcggcgaagacggccaagaag
gcctga
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