Dermacoccus sp. PAMC28757: H7F30_05400
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Entry
H7F30_05400 CDS
T08446
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
derm
Dermacoccus sp. PAMC28757
Pathway
derm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
derm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
H7F30_05400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
derm03400
]
H7F30_05400
DNA repair and recombination proteins [BR:
derm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
H7F30_05400
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QNK53720
LinkDB
All DBs
Position
1112280..1113071
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AA seq
263 aa
AA seq
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MRAIWKGAVSFGLVNVPVRLYSATENHDVQFRQVHAEDGGRIKYQRVCSLDGEKVAYSDI
AKGYETDEGQMVVLTDADLAELPLSTSKEIAVDRFVPAEQISPLVLDKVYYLEPDKAAIK
PYALLRSALEESGRVAVVTVAIRTRVTVAVLRVHEDTLVLQTLLWPDEVREPDFAVLAEK
SEVTDAEQAMAAMLVESLSGDFDPSAYEDEYEQAVKQLVEAKLAGGEVHEPEAEKEESAQ
VVDLLAALQASVDRAKKARGEAV
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgagccatctggaagggcgcggtcagcttcggcctcgtcaacgtgccggtgcggttg
tactccgccaccgagaaccacgacgttcagttccgtcaggtccacgccgaggacggcggg
cgcatcaagtaccagcgggtgtgcagtctcgatggcgagaaggtggcctacagcgacatc
gcgaagggctacgagaccgacgagggtcagatggtcgtgctcaccgacgccgacctcgcc
gagctgcccctgtcgacgagcaaggagatcgcagtcgaccgcttcgtgccggccgagcag
atcagcccgctcgtgctcgacaaggtctactacctcgaacccgacaaggccgcgatcaag
ccgtacgcccttctgcgcagcgcgctcgaggagagcggtcgcgtcgccgtcgtgacggtg
gccatccgcacgcgcgtgaccgtggcggtgttgcgcgttcacgaggacaccctcgtgctg
cagacgctgttgtggcccgacgaggtgcgcgagcccgacttcgcggtgctcgccgagaag
agcgaggtcaccgacgccgagcaggcgatggccgcgatgctggtcgaatcgctctcgggt
gacttcgacccgagcgcctatgaggacgagtacgagcaggccgtcaagcagctcgtcgag
gccaagctcgccgggggagaggtccacgagcccgaggccgagaaggaggagagcgcccag
gtcgtcgatcttctcgcggctctgcaggccagcgtcgaccgggcgaagaaggcgcgcggc
gaagcggtctga
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