KEGG   Dermacoccus sp. PAMC28757: H7F30_09545
Entry
H7F30_09545       CDS       T08446                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
derm  Dermacoccus sp. PAMC28757
Pathway
derm00010  Glycolysis / Gluconeogenesis
derm00020  Citrate cycle (TCA cycle)
derm00260  Glycine, serine and threonine metabolism
derm00280  Valine, leucine and isoleucine degradation
derm00310  Lysine degradation
derm00380  Tryptophan metabolism
derm00620  Pyruvate metabolism
derm00630  Glyoxylate and dicarboxylate metabolism
derm00640  Propanoate metabolism
derm00670  One carbon pool by folate
derm00785  Lipoic acid metabolism
derm01100  Metabolic pathways
derm01110  Biosynthesis of secondary metabolites
derm01120  Microbial metabolism in diverse environments
derm01200  Carbon metabolism
derm01210  2-Oxocarboxylic acid metabolism
derm01240  Biosynthesis of cofactors
Module
derm_M00009  Citrate cycle (TCA cycle, Krebs cycle)
derm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
derm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
derm_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:derm00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    H7F30_09545 (lpdA)
   00020 Citrate cycle (TCA cycle)
    H7F30_09545 (lpdA)
   00620 Pyruvate metabolism
    H7F30_09545 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    H7F30_09545 (lpdA)
   00640 Propanoate metabolism
    H7F30_09545 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    H7F30_09545 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    H7F30_09545 (lpdA)
   00310 Lysine degradation
    H7F30_09545 (lpdA)
   00380 Tryptophan metabolism
    H7F30_09545 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    H7F30_09545 (lpdA)
   00670 One carbon pool by folate
    H7F30_09545 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:derm04147]
    H7F30_09545 (lpdA)
Enzymes [BR:derm01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     H7F30_09545 (lpdA)
Exosome [BR:derm04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   H7F30_09545 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 HI0933_like FAD_oxidored FAD_binding_2 NAD_binding_8 GIDA FAD_binding_3 Thi4 DAO AlaDh_PNT_C 3HCDH_N 2-Hacid_dh_C T6SS_TssG Lycopene_cycl
Other DBs
NCBI-ProteinID: QNK51901
LinkDB
Position
complement(1981203..1982603)
AA seq 466 aa
MAKHFDVVVLGAGPGGYVAAIRASQLGLSVAVIEKKYWGGVCLNVGCIPSKALLKNAELA
HVLTHEKDKFGITGDASMEYGPTHKRSRQVSAGIVKGVHYLMKKNKITEIDGWGTLKSDK
TVSVELNDGGSEDVTYDNLIIATGATVRTMPGVDLSENIVSYEEQILTDELPKSIIIGGS
GAIGVEFAYVMKNFGVDVTIVEFADRMVPTEDADVSKELLKHYKKLGVKVMTGTKVEKAE
DTGSGVKVTVSPAKGGDSQVLEADKMLSAFGFKPRTEGYGLEDLGVELTDRGAIAIDGRG
RTNVEGVYAIGDVTAKLMLAHTAEAMGIVAAETIAGAETMEINFDMIPRATYCQPQVASF
GYSEAQAKEKGYDVKTATFPFTANGKAMGLGEAVGFVKVIADAKHNELIGAAMIGPDVTE
LLPVLNLAQQWDLTADEVSRNIFAHPTLGEAVKEAVHGIAGHMINL
NT seq 1401 nt   +upstreamnt  +downstreamnt
gtggctaagcactttgatgtcgtcgtcctcggcgccggtcccggtgggtacgtcgcggca
atccgcgcctcccagctcgggctgagcgtcgccgttatcgagaagaagtactggggaggt
gtctgcctcaacgtcgggtgtatcccgtcgaaggcccttctgaagaacgcggaactcgcg
cacgtgctcacgcacgagaaggacaagttcggcatcaccggtgatgcctcgatggagtac
ggcccgacgcacaagcgttcccgccaggtctccgcgggcatcgtcaagggtgtccactac
ctcatgaagaagaataagatcaccgagatcgacggctggggcacgctcaagtccgacaag
acggtctcggtggaactcaacgacggcggcagcgaggacgtcacctacgacaacctcatc
atcgccacgggcgccaccgtgcgcacgatgccgggcgtcgacctcagcgagaacatcgtc
agctacgaggagcagatcctcaccgacgagctgccgaagtcgatcatcatcggcggttcg
ggcgccatcggcgtcgagttcgcctacgtcatgaagaacttcggcgtcgacgtcacgatc
gtcgagttcgccgaccgcatggtgcccaccgaggacgccgacgtgtccaaggagctgctc
aagcactacaagaagctcggcgtcaaggtcatgaccggcacgaaggtcgagaaggccgag
gacaccggctccggcgtcaaggtcaccgtctcccccgcgaagggtggcgacagtcaggta
ctcgaagccgacaagatgctctccgcgttcggcttcaagccgcgcaccgagggctacggc
ctcgaagacctcggcgtcgagctcaccgaccgcggtgccatcgcgatcgacggccgcggc
cgcacgaacgtcgagggcgtctacgccatcggtgacgtcaccgccaagctcatgctcgcc
cacacggccgaggcgatgggcatcgtcgccgcggagacgatcgccggcgccgagaccatg
gagatcaacttcgacatgatcccgcgcgccacgtactgccagccgcaggtggcctcgttc
ggctactccgaggctcaggccaaggagaagggctacgacgtcaagacggcaacgttcccc
ttcacggccaacggcaaggccatgggcctcggcgaggccgtcggcttcgtcaaggtgatc
gcggacgccaagcacaacgaactgatcggcgccgcgatgatcggcccggacgtcacggag
cttctgccggtactcaacctggctcagcagtgggacctgacggccgacgaggtgtcgcgc
aacatcttcgcgcacccgacgctcggcgaggctgtcaaggaagccgttcacggcatcgcg
gggcacatgatcaacctctga

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