Dermacoccus sp. PAMC28757: H7F30_12045
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Entry
H7F30_12045 CDS
T08446
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
derm
Dermacoccus sp. PAMC28757
Pathway
derm03030
DNA replication
derm03430
Mismatch repair
derm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
derm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H7F30_12045
03430 Mismatch repair
H7F30_12045
03440 Homologous recombination
H7F30_12045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
derm03032
]
H7F30_12045
03400 DNA repair and recombination proteins [BR:
derm03400
]
H7F30_12045
Enzymes [BR:
derm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H7F30_12045
DNA replication proteins [BR:
derm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H7F30_12045
DNA repair and recombination proteins [BR:
derm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H7F30_12045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QNK52319
LinkDB
All DBs
Position
2526169..2527896
Genome browser
AA seq
575 aa
AA seq
DB search
MEITTAQTGVQTSLSDLGTPLVDVTFVVVDLETTGGRPEAEGITEIGAVKVRGGEILGEF
ATLVDPGHEIPVQIQRLTGITTSMVYDAPRIAGVLPAFLEFLGHDSVLVAHNAGFDVGFL
KAACAGHAIDWPAPDVVDTVKLARALVPRDEVRNHRLGTLAAHFGAHTTPNHRALADARA
TVDVLHALLARAGSLGVTSREDLLVFGAKVPAARRRRATMADGLPEAPGVYVFKDEQGVP
LYVGTSGNIKRRVKSYFTASEKRRGMGLMVDLAHTVTPIPCATALEAHVREIRLIAEFRP
RFNRRSARPEKAAWLKVTDERFPRLSVVRSRRDDEALYVGPFRSKTAAGAARDAIHDVRR
IRQCTQPISSKGAPPCVLAEIDRCDAPCLGELTPEAYAPIVTALRQELESGTSTLVSDLE
GRLARLATDERFEEARATRDALVEMLRGTDRHQRRAPLVENPHFVAARPRAGGGWEFAVV
RYGRLAGSAHANRGEDPRPVIESLALFAEAVSPTDETLPEESDVVLRWLERPGTRVVDSN
LPWVSPVGGAGGALSRLDPLVERARELAWEDERAS
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggagatcacgacagcgcagacgggcgtgcagacgtcgctcagtgacctcggcacgccc
ctcgtcgacgtgacgttcgtcgtggtcgatctcgagacgacgggcgggcgccccgaggcc
gagggcataaccgagatcggcgccgtgaaggtgcgcggcggcgagatcctgggagagttc
gccacgctggtcgaccccggccatgagatccccgtccagatccagcgcctcaccggcatc
acgacgagcatggtgtacgacgccccacgcatcgcgggggttctgccggccttcctcgag
ttcctcggacatgacagcgttctcgtggcccacaacgccggattcgacgtcggtttcctc
aaagccgcgtgcgccggccacgccatcgactggcccgcccccgacgtcgtcgacacggtg
aagctcgctcgcgccctcgtcccacgcgacgaggtgcgcaaccaccgcctcggaaccctg
gccgcgcacttcggtgctcacacgacgcccaatcaccgcgctctcgccgacgcgcgagcc
acggtcgacgtgctgcacgctctcctcgcccgtgccggctcactcggcgtgacgtcccgc
gaggatctcctcgtcttcggcgccaaggtgcccgctgcgcgtcgccgtcgcgcgacgatg
gccgacggcctacccgaggcgccgggcgtctatgtcttcaaggacgagcagggcgttccg
ctctacgtcggcacgtcgggaaacattaaacgtcgagtcaagagttacttcacggcgtcc
gagaagcggcgcggaatgggcctcatggtcgacctcgcgcacaccgtcacgcccatcccc
tgcgccaccgcgctcgaagctcatgtgcgcgagatccgattgatcgcagagttccgccct
cgcttcaatcggcgctccgcccggcccgagaaggccgcatggctcaaggtcaccgacgag
cgcttcccccgcttgtccgtcgtccgttcccgacgcgacgacgaggccctctacgtgggc
ccgttccgatcgaagaccgcggccggcgccgcgcgtgacgccatccacgacgtgcgccgg
atccgccagtgcactcaaccgatttcgagcaagggcgcgcccccgtgcgttctcgccgag
atcgaccgatgcgatgccccctgcctcggcgaactcacaccggaggcctacgcgccgatc
gtgacggcgctgcgccaggagctcgagtccggcacctcgacgctcgtctccgatctcgaa
ggacgtctcgctcgcctggccacggacgagcgcttcgaagaggcccgcgccacgcgcgac
gccctcgtggagatgctgcgcggcaccgatcgtcaccagcggcgcgccccgctcgtcgag
aacccccacttcgtcgctgcgcggccacgcgccggcggaggctgggagttcgccgtcgtc
cgatacgggcgactagccgggtcggcacacgcgaatcgcggcgaagatccgcgcccggtc
atcgagtcactcgccctcttcgccgaagcggtgtcgcccaccgacgagacactcccagag
gagagcgacgtggtgctgcgctggctcgagcgccccggaacccgcgtggtcgactcgaat
cttccgtgggtcagccccgtgggcggtgccggcggcgccttgtcacggctcgatcccctc
gtcgagcgcgctcgcgaactcgcgtgggaggacgagcgcgcttcgtga
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