Dermacoccus sp. PAMC28757: H7F30_13465
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Entry
H7F30_13465 CDS
T08446
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
derm
Dermacoccus sp. PAMC28757
Pathway
derm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
derm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H7F30_13465 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
derm03021
]
H7F30_13465 (rho)
03019 Messenger RNA biogenesis [BR:
derm03019
]
H7F30_13465 (rho)
Transcription machinery [BR:
derm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
H7F30_13465 (rho)
Messenger RNA biogenesis [BR:
derm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H7F30_13465 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
NACHT
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
QNK52570
LinkDB
All DBs
Position
complement(2839796..2841895)
Genome browser
AA seq
699 aa
AA seq
DB search
MSEQTPAAPAQSSPRGALSAMRLDELKQLAQSMGIGGISKMRKVDLVAAIRAARAEANGV
SGSRSQAGELTSTAPSARRAVREEQAAEAPSEKPQRAQRDGDSTNANAAGAPAGDASDNG
DEQGQGRPRTRRGRRGGEERPKRDGQNDGANAQNESGQNDASNDGRGQRDERRDGGKRDG
NDSGSNRGSSDQSGSDKGHDKSSHERPDKHDGSDKRERGQGNQGNQNERRDGERGDKRDN
RENRDNNDRSDKRDDRSDKNERGGRNERNNNGNNNDDDERGGRRRRQRGRDRDRSGRRGG
RGRDFEDEAPEIREDDVLVPVAGIVDVLDNYAFVRTTGYLSGPTDVYVPMNLVKKNALRK
GDAVTGAVRALREGEQLPARQKFNALVRLDTVNGMTVDAAKKRVEFGKLTPLYPQERLRL
ETTPNVLTTRIIDLVAPIGKGQRGLIVAPAKAGKTMVMQSIANAITTNNPECHLMVVLVD
ERPEEVTDMQRAVKGEVIASTFDRPATDHTTVAELAIERAKRLVEMGHDVVVLLDSITKL
GRAYNLAAPASGRILSGGVDSAALYPPKKFFGAARNIENGGSLTILATALVETGSRMDEV
IFEEFKGTGNMELKLDRGLANRRIFPAVDINASGTRREEILLSAEELKIMWKLRRVLAAL
DQQQGIELLIDRLKKTKHNVEFLMQVQQTSNIKLDDDED
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgaacaaacgcctgccgcaccggcgcagtccagcccgcgcggcgcgctgtccgcg
atgcgcctcgacgagctcaagcagctcgcgcagagcatgggtatcggtggcatctccaag
atgcgcaaggtcgacctcgtcgctgccattcgcgcagcgcgcgcggaggccaacggtgtg
agcggcagccgctcgcaggccggcgagctcacctcgaccgcgccgagcgcgcgtcgtgcc
gtgcgtgaggagcaggccgccgaagcgcccagcgagaagccgcagcgcgcccagcgtgac
ggtgactccacgaacgcgaacgccgccggcgcaccggcaggtgacgcgtcggacaacggt
gacgagcaggggcagggacgcccgcgtacccgtcgcggtcgccgcggcggcgaggagcgt
ccgaagcgcgacggccagaacgacggcgcgaacgctcagaacgagtccggccagaacgac
gcgtcgaacgacggccgtggccagcgcgacgagcgccgtgacggtggcaagcgtgacggc
aacgactccggttcgaaccgcggatcctccgaccagtcgggttccgacaagggccacgac
aaaagcagccacgagcgcccggacaagcacgacggctccgacaagcgcgagcgtggccag
ggcaaccagggcaaccagaacgagcgtcgtgacggtgagcgcggcgacaagcgggataac
cgcgagaaccgcgacaacaacgaccgttcggacaagcgcgacgaccgttccgacaagaac
gagcgtggcgggcgcaacgagcgcaacaacaacggcaacaacaacgatgacgacgagcgc
ggcggacgccgccgtcgtcagcgcggccgtgaccgtgaccgttccggccgccgaggtggc
cgtgggcgtgacttcgaggacgaggcacccgagatccgcgaggacgacgtcctcgtgccg
gtcgccggcatcgtcgacgtcctcgacaactacgccttcgtgcgcaccaccggctacctc
tcgggcccgacggacgtctatgtcccgatgaacctcgtcaagaagaacgcactgcgcaag
ggtgacgccgtcaccggcgccgtgcgggccctgcgcgagggtgagcagctgccggcacgc
cagaagttcaacgcgctcgtgcgcctcgacaccgtcaacggcatgacggtcgacgccgcc
aagaagcgcgtcgagttcggcaagctgacgccgctctacccgcaggagcgcctgcgcctc
gagacgacgccgaacgtcctcacgacccgcatcatcgacctcgtcgcccccatcggtaag
ggccagcgcggcctcatcgtcgcgcccgccaaggccggtaagacgatggtcatgcagtcg
atcgcgaacgccatcacgacgaacaaccccgagtgccacctcatggtcgtcctcgtcgac
gagcgtcccgaggaagtcaccgacatgcagcgcgcggtcaagggtgaggtcatcgcctcc
accttcgaccgtcccgccacggaccacacgacggtcgccgagctcgccatcgagcgcgcc
aagcgcctcgtcgagatgggtcacgacgtcgtcgtcctcctcgactcgatcaccaagctc
ggacgcgcctacaacctcgccgccccggcgagcggtcgcatcctctccggtggtgtcgac
tcggccgcgctctacccgccgaagaagttcttcggtgccgcgcgcaacatcgagaacggc
ggatcgctgacgatcctcgccacggcgctcgtcgaaaccggctcgcgcatggacgaggtc
atcttcgaagagttcaagggcaccggcaacatggagctcaagctcgaccgaggcctcgcc
aaccgccgcatcttcccggccgtcgacatcaacgcctccggtactcgacgcgaggagatc
ctcctgtcggccgaagagctgaagatcatgtggaagctgcgtcgcgtgcttgccgcactc
gaccagcagcagggcatcgagctgctcatcgaccgcctcaagaagacgaagcacaacgtc
gagttcctcatgcaggttcagcaaacctccaacatcaagctggacgacgacgaggactga
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