Dermacoccus sp. PAMC28757: H7F30_14660
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Entry
H7F30_14660 CDS
T08446
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
derm
Dermacoccus sp. PAMC28757
Pathway
derm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
derm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H7F30_14660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
derm03400
]
H7F30_14660
Enzymes [BR:
derm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H7F30_14660
DNA repair and recombination proteins [BR:
derm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H7F30_14660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
UvrD_C_2
AAA_22
PDDEXK_1
AAA_11
Helicase_RecD
ResIII
NACHT
Motif
Other DBs
NCBI-ProteinID:
QNK54338
LinkDB
All DBs
Position
3087112..3090450
Genome browser
AA seq
1112 aa
AA seq
DB search
MQPFSITAPIPEGTTLIEASAGTGKTWTLAALVTRLVAEEELPLDELLVVTFSRAASQEL
RERVRGQLEDTLHRLGAPAGDDDDELVTALRGGGAEAVDQRRARLARALATFDSATIATI
HQFCHYVLKSLGVAGDSDPYATLVEDTETLRQEVVDDVFLRFSKEANFTLDYEETQKYAK
ATLDNSTAEIGPVPPPAHLETAIAFSRAVREEYARRKRRGGILEYDDLLSQLRSALNDEN
SPARDRMRERWSVVLVDEFQDTDPVQWEVFSRAFGEKGRSLILVGDPKQAIYAFRGGDVQ
TYLSAAKTAVNSFTLPTNYRSDAPLVESLQTLMAGVQLSPGIVTHRVDAAQHTSRLGGQP
GQADAPVELRWVPESGLAVGLARSIVLRDVAARAAQLLAGETTFDGEPLAPHHLAVLCRT
NNQLVEVREYLRELGIPAVMMSSESVLRSSAGRWWLELLMALEQPHRPERVRAACLTPLV
GWSAERLDAIDDSGVDEAAELVAMLLARFHSGGVPGIVDALRARGMLARLLRRTGGERDV
TDIEHCAQLLAARQMSAQAGISSLVAWLQEQSAQDAKATADARIMRLDSDALAVTLSTIH
SSKGLQYPIVLAPTLWDRHDQPTKTPGVVHRNNRRELSFDPATVNAPEATEENTGEEMRL
AYVAMTRAQSGLVLWWAGTKQNTSKSALHRLLFGQANGPEALDALLQERADGASEKWLTT
TEQNGTPKVDRVREVFAAWAKHGAFTVQEIDPNTVPPHITVRRGDARLAVNTFDDADVDR
AWRRTSYSALSAAGEAADELAAVGDVTSEPEHLAVRLDEDADVELATPPSPDMPGSEISS
PMANQPMGATFGSLVHGVLEEADFQAADLRDELRAHILEQQMRWPADVEVESLADALVAV
MHTPFGPLADDVTLRDIVSTDRLPEMDFELPLSGGEEPHPSSTLRAFAPLLRKHLDEGDP
LRTYADQLDTSALGDELLRGYLTGSIDLTFRHGGRYFVVDYKTNRLGDVDAALTLADYAP
SRLVEAMNHSSYPLQAILYSVVLHRYLRWRLPGYNPDEHLGGVMYLYVRGMAGPDTPREN
GTPCGVFTWRPPATLVVALSDAVDGVRAGGVR
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgttcagcatcaccgctcccatcccggagggcaccacactcatcgaagccagc
gccggcacgggcaagacgtggaccctcgccgcgctcgtcacccggctcgtggccgaggag
gaactccccctcgacgagcttctcgtcgtcacgttctcgcgcgccgcgagccaggaactg
cgtgaacgcgtccgcggccagctcgaggacacgctgcaccgcctcggcgcaccagccggc
gatgacgacgacgaactcgtcacggcgctgcgcggcggcggcgccgaggcggtggatcag
cgccgggcccgtctggcccgagcgctcgcaacgttcgactccgccaccatcgcgacgatc
caccagttctgccattacgtgctcaagagtctgggcgtcgcgggcgactcggacccgtac
gccacgctcgtcgaggacaccgagaccctgcgccaggaggtggtcgacgacgtcttcctc
cggttcagcaaggaagcgaacttcaccctcgactacgaggaaacacagaaatacgcgaag
gccacgctggacaacagcaccgcagagatcggcccggttccgccgccggcgcacctcgag
accgcgatcgccttcagccgtgccgtgcgggaggagtacgcacgccgcaagcgccgcggc
ggcatcctcgagtacgacgacctgctctcccagctgcgctcggcgctcaacgacgagaat
tcccccgcacgtgatcgcatgagggagcgctggagcgtcgtcctcgtcgacgagttccag
gacaccgacccggtccagtgggaggtcttctcccgcgcattcggcgagaagggccgctca
ctcatcctcgtcggcgacccgaaacaggccatctacgccttccgcggtggcgacgtacag
acatacctgtcggcagcgaaaacggccgtcaactccttcacgctgccgacgaactaccgc
agcgacgctccgctcgtcgagagcctgcagacactgatggctggtgtccagctctcaccc
ggcatcgtgacgcaccgcgtcgacgcggcccagcacacctcacgcctcggcggacagcca
gggcaggctgacgcccccgtcgaactgcgctgggttcccgagtccgggctggccgtcggg
ctggcccgctccatcgtcctacgcgacgtcgcagcgagggccgcgcagcttctcgccggg
gaaacgacgttcgacggtgagcccctcgctccccatcacttggccgtcctgtgccgtacc
aacaatcagctcgtcgaagtgcgcgagtacctgcgcgagttgggcattccggcggtcatg
atgtcgagcgagtcggtactgcgaagctccgccggccggtggtggctcgaactgctcatg
gcactcgagcagccgcaccgccccgagcgggtcagggccgcctgcctcacgccgctcgtc
gggtggtccgccgagcgcctcgacgcgatcgacgactcgggcgtcgacgaggcagccgaa
ctcgtcgccatgttgctggcgcggttccattccggcggcgttcctggcatcgtcgacgcg
ctacgtgcgcgcggcatgctcgcccgcctcctgcgccgcaccggcggagaacgcgacgtc
accgacatcgaacactgcgcccagttgctcgcggcccggcagatgtcggcccaggccggc
atctcctcgctcgtcgcctggctgcaggagcagagcgcacaggacgccaaagcaaccgcc
gacgcacgcatcatgcgcctcgactccgacgccctcgccgtcacgttgtcgaccatccac
agcagcaagggtctgcaataccccatcgttctggccccgacgctgtgggaccggcacgac
cagccgaccaagactccgggggtcgtgcaccgcaacaaccgccgggagctgtccttcgac
cccgcgacggtgaacgctcccgaggccacggaggagaacaccggggaggagatgcgtctg
gcgtacgtcgcgatgacgcgggcgcagagcggcctcgtcctgtggtgggccggcacgaag
cagaacacgtccaagagcgccctgcaccggttgctcttcgggcaggccaacggccccgag
gccctcgatgcgctccttcaggagcgcgccgacggagcatccgagaagtggctcaccacc
acggaacagaacggcacccccaaggtggaccgggtccgcgaggtctttgccgcttgggcg
aagcacggcgcgttcaccgtccaagaaatcgaccccaacaccgttcctccgcacatcacg
gtcaggcggggtgacgcgcggcttgcggtgaacaccttcgacgacgcggacgtcgatcgc
gcctggcgccgtacgtcctactcggcgctctccgccgccggtgaggccgccgacgaactc
gccgccgtcggtgatgtgacaagcgaacccgagcacctcgccgtccgcctcgacgaggac
gccgacgtcgaactcgcgacgccgccgtccccggacatgccgggcagcgagatctcctcc
cccatggcgaatcagccgatgggcgcgacgttcggttccctcgtccacggcgtgctcgag
gaggctgacttccaggccgcggacctgcgcgacgagctgcgggcccacatcctcgagcag
cagatgcgctggcccgcggatgtcgaggtcgagtcactcgccgacgccctcgtcgccgtc
atgcacacgcccttcggccccctggccgacgacgtgacgctgcgggacatcgtctccacc
gatcgactgcccgagatggacttcgagctccctctctccggcggcgaggagccccacccg
tcatcgacgttgcgcgctttcgctccgctgctgcgcaagcacctcgacgaaggcgacccc
ctgcgcacctatgcggatcagctcgatacctcggcactcggcgatgagctcctgcgcggc
tacctcacgggttcgatcgacctcaccttccgtcatggtggccgctacttcgtcgtcgac
tacaagaccaaccgactcggcgatgtcgacgcggcgctgacgctggccgactacgcgccg
tcgcggctcgtcgaggcgatgaaccactcgtcgtatccgctgcaggcgatcctgtactcc
gtcgtgctgcaccgctacctgcgttggcggctgcccggctacaaccccgacgagcatctc
ggaggcgtgatgtacctctacgtccgtggcatggccggccccgacacgccgcgcgagaac
ggcacgccgtgcggagtcttcacctggcggccgccggcgacactcgtcgtcgcgctgtcc
gacgccgtcgacggggtacgggcaggtggtgtccgatga
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