Desulfuromonas soudanensis: DSOUD_0246
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Entry
DSOUD_0246 CDS
T04049
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
des
Desulfuromonas soudanensis
Brite
KEGG Orthology (KO) [BR:
des00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
des03009
]
DSOUD_0246 (dbpA)
Enzymes [BR:
des01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DSOUD_0246 (dbpA)
Ribosome biogenesis [BR:
des03009
]
Prokaryotic type
rRNA helicases
DSOUD_0246 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
CMS1
AAA_22
AFOR_N
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ALC15046
UniProt:
A0A0M4CYV0
LinkDB
All DBs
Position
complement(265504..266886)
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AA seq
460 aa
AA seq
DB search
MIPTAFATLPLDPSLLENLTSLGYSEMTPIQARSLPPILSGKDVIAQAKTGSGKTAAFGI
GLLSRLVVSHFGVQGLVLCPTRELADQVGKELRRLARFTDNIKILTLCGGVPFGPQLGSL
EHGAHIVVGTPGRLLDHLRRGSLNLKSLRMLVLDEADRMLDMGFSEDLSAIVASAPSNRQ
TLLFSATYPESIAAMSATVQHQPVTVKVEAIHDGRAIRQIFFNVERVERLAALARILGHY
RFESTLVFCNTKKETQEVADALTERGFSALAIHGDLEQRERDQVLARFANKSVSILVATD
VAARGIDIKELTAVINFELTRDPEVHIHRIGRTGRAGEEGLALSLVTAAENRRVAAIEEY
LGDPVPRAELNTLTMPSSAPLEPPMVTLCIDGGRKNKVRPGDILGALTGEAGIAGSEVGR
INVFDFHTYVAISRPSARVALARLSANKIKGRFYKIRKFD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgatccccaccgcctttgccaccctccccctcgacccttcgctcctcgagaaccttacc
tccctcggctacagcgaaatgacgccgatccaggcccgcagcctgccgcccatcctctcc
ggaaaggacgtcatcgcccaggccaagaccggcagcggcaagaccgccgccttcggcatc
ggcctgctgtcgcgcctggtggtgagtcacttcggcgtccagggtctggtgttgtgcccg
acccgcgagctcgccgaccaggtcggcaaggagctgcgacggctcgcccgtttcaccgac
aacatcaagatcctcaccctctgcggcggggtccccttcggcccccagctcggctccctc
gaacacggcgcccatatcgtcgtcggcaccccggggcgcctcctcgaccacctgcggcgc
ggcagcctcaacctcaaatcgttgcgcatgctcgtcctcgatgaagccgatcgcatgctc
gacatgggcttttccgaggatctctccgccatcgtcgccagtgcgccgagcaatcgccag
accctgctcttttcggccacctaccccgagtcgattgccgccatgagcgccaccgtgcag
caccaaccggtcacggtgaaggtcgaagcgattcatgacggccgggcgatccggcagatt
tttttcaatgtggagcgcgtcgagcgccttgccgccctggcgcggattctcggccattac
cgattcgaatcgaccctggtcttctgcaacaccaaaaaggagacgcaggaggtggccgat
gcgctgaccgagcgcggattctcggcgctggcgatccacggcgacctcgagcagcgcgag
cgagaccaggtgctggcgcggtttgccaacaaaagcgtctccattctcgtcgccaccgac
gtggcggcccggggaatcgacatcaaggagctgacggcggtgatcaactttgagctcacc
cgcgatccggaggtgcacatccaccgcatcggccgcaccggccgggccggcgaagagggg
ctggccctgagcctggtgaccgccgcggagaatcgacgggtggcggccattgaagagtat
ctcggtgatcccgttccccgcgccgaactgaataccctgaccatgccgtcgtccgccccc
ctcgaaccgcccatggtgaccctctgcattgacggcggccgcaagaacaaggtgcgcccc
ggcgatatcctcggggccctcaccggcgaggcgggaatcgccggaagcgaggtcggcaga
atcaatgtcttcgattttcacacctacgtcgccatatcccgccccagcgcgagagtcgcc
ctggcgcgcctgagcgccaacaaaatcaaggggcgcttttataaaatccgcaaattcgac
tga
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