KEGG   Desulfuromonas soudanensis: DSOUD_0367
Entry
DSOUD_0367        CDS       T04049                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
des  Desulfuromonas soudanensis
Pathway
des03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:des00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DSOUD_0367 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:des03400]
    DSOUD_0367 (uvrA)
DNA repair and recombination proteins [BR:des03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DSOUD_0367 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DSOUD_0367 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_16 AAA_21 AAA_25 BCA_ABC_TP_C AAA_23 AAA_14 RsgA_GTPase AAA_18 nSTAND1 SLFN-g3_helicase nSTAND3 Viral_helicase1 AAA_33 ATPase DnaJ_CXXCXGXG
Other DBs
NCBI-ProteinID: ALC15162
UniProt: A0A0M4DEV1
LinkDB
Position
complement(399100..401913)
AA seq 937 aa
MVDKIVIKGACEHNLKNIDVEIPREKLVVITGVSGSGKSTLAFDTIYAEGQRRYVESLSS
YARQFLEQMEKPDVESIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLFARVGTVH
CHGCGKEIASQTVEQMVDRIIAFPEKTRLLLLAPIIRGRKGEYRKELRQLQADGFVRVRI
DGVMHELSEPMELDKKKKHTIEVVVDRLVIKEGLQGRLADSLETALRLADGIVRVEVIDG
ESQLYSQQHACVDCGISYPEITPRMFSFNNPYGACPACTGLGTRMYFDPDQVVPNPALSL
REGAIAPWESRSGVYYQQLLEALSDHYGFDINTPFEKLPENLRRILLTGSGKEEVRFFFD
QGGRRHFYNKVFEGVVTNLERRYHETDSEAVRENLERFMNVMPCPTCNGARLRPETLFVR
VAGKNICEVTALAISEAERFFADLHFSPKKAEIARRILKEIRERLSFLAHVGLDYLSLDR
NSGTLSGGEGQRIRLATQVGSSLVGVLYILDEPSIGLHQRDNRRLLETLKRLRDLGNTVL
VVEHDEETILEADYVLDMGPGAGVHGGEVVAQGTPQEILANPASLTGRYLSGELSIPLPA
QRRTTDRFLQIKGARENNLKGVDVAIPLGVMTCVTGVSGSGKSTLIIDTLFKTLSQRLYR
SRDKAGKVDELLGLELLDKVIDIDQSPIGRTPRSNPATYTGVFTDIRDLFARLPEAKVRG
YKPGRFSFNVKGGRCEACQGDGIIKIEMHFLPDIYVQCEICKGARYNRETLEVKYKGKSI
AELLDLTVNQAAVFLENIPRIKNKLETIRDVGLGYIKLGQSATTLSGGEAQRVKLAKELG
KRATGRTIYILDEPTTGLHFADIQKLLDVLQRLVDTGNTVLIIEHNLDVIKTADHVIDLG
PEGGGGGGEVIACGTPEEVALSSRSHTGRYLRPYLHL
NT seq 2814 nt   +upstreamnt  +downstreamnt
atggttgacaaaatcgtcatcaaaggcgcctgcgagcacaacctgaagaacatcgacgtc
gagatcccccgggagaaactggtggtgatcaccggcgtctccggctcgggaaaatcgacc
ctggccttcgacaccatctacgccgaggggcaacgccgctacgtggagagcctttcgtcc
tacgcccggcagtttctcgagcagatggaaaagcccgacgtggagagtatcgaggggctc
tctcctgccatctccatcgagcagaagaccacctcgaagaacccccgctccaccgtcggc
accgtcaccgagatctacgactatctgcgcctcctctttgcccgggtcggcaccgtgcac
tgccacggctgcggcaaggagatcgcctcccagaccgtggagcagatggtcgaccgcatc
attgcctttccggagaagacccgcctcctccttctggcgcccatcatccgcggccgcaag
ggggaataccggaaggaactcaggcagctgcaggccgacggcttcgtgcgggtgcgtatc
gacggcgtcatgcacgaactctccgaaccgatggaactcgacaagaaaaagaagcacacc
atcgaggtggtcgtcgatcgcctggtcatcaaggaggggctgcaggggcgcctggccgac
tccctggagaccgccctgcgcctggccgacggcatcgtccgggtcgaggtgatcgacggc
gagagtcagctctattcgcagcagcacgcctgcgtcgactgcggaatctcctacccggag
atcacaccgcggatgttttccttcaacaatccctacggtgcctgccccgcctgcaccgga
ctgggaacccggatgtacttcgaccccgaccaggtggtccccaaccccgccctctccctg
cgcgaaggggccatcgccccctgggaaagccgcagcggcgtctattaccagcagctcctc
gaggccctttccgaccactacggtttcgacatcaacacccccttcgagaagctcccggag
aaccttcgccggatcctgctgaccggctcggggaaggaggaagtccgcttcttcttcgac
cagggggggcgtcgccacttctacaacaaggtcttcgaaggggtggtcaccaacctcgag
cggcgctaccatgagaccgactcggaggcggtgcgggagaacctcgaacggttcatgaac
gtcatgccctgcccgacctgcaacggcgcgcggctgcgccccgagaccctcttcgtgcgg
gtggccggcaaaaacatctgcgaggtcacggccctggccatcagcgaggcggaacgtttc
ttcgccgacctgcacttttcgccgaagaaggcggagatcgcccggcgcatcctcaaggag
atccgcgagcgcctctcctttctcgcccatgtcggcctcgactacctctccctcgaccgc
aattcggggaccctctccggcggcgaggggcagcgcatccgcctcgccacccaggtcggc
tcctcgctggtgggggtcctctacatcctcgacgaaccgtccatcgggttgcaccagagg
gacaaccgccgcctcctggagacgttgaaacgactgcgcgacctcggcaacaccgtgctg
gtcgtcgagcacgacgaagagacgatcctcgaagccgattacgttctcgacatgggaccg
ggagcgggggtccacggcggcgaagtcgtcgcccaggggacaccgcaggagatcctcgcc
aatcccgcctccctcaccgggcgctacctctcgggagaactctccatccccctgccggcg
cagcgccgcaccaccgatcgtttcctgcagatcaaaggggcccgggaaaacaacctcaag
ggggtcgacgtcgccatccccctcggggtcatgacctgcgtcaccggggtctcggggtcg
gggaaatcgaccctgatcatcgacaccctcttcaaaaccctctcccagcgcctctaccgc
agtcgcgacaaggccggcaaggtcgacgaactcctcggtctcgaactcctcgacaaggtc
atcgacatcgatcagtcccccatcggccgcaccccccgctccaaccccgccacctacacc
ggggtcttcaccgacatccgcgacctcttcgcccgcctccccgaggccaaggtgcggggg
tacaaaccggggcgcttctccttcaacgtcaagggggggcgctgcgaggcctgtcagggg
gacggcatcatcaagatcgagatgcactttctccccgacatctacgtccagtgcgaaatc
tgcaagggggcgcgctacaaccgcgagaccctcgaggtcaaatacaaggggaaaagcatc
gccgaactactcgacctgacggtcaaccaggcggcggtcttcctcgagaacattccgcgg
atcaagaacaagctggagacgatccgcgacgtcggcctcggctatatcaagctcggccag
agcgccaccaccctctcggggggggaggcgcagcgcgtcaaactcgccaaggagctcggc
aagcgcgccaccgggcgcaccatctacatcctcgacgagccgaccaccggactgcacttc
gccgacatccagaaactgctcgacgtgctgcagcgcctggtcgacaccggcaacacggtc
ctgatcatcgaacacaacctcgatgtcatcaagacggccgaccacgtcatcgacctcggc
ccggaaggggggggcgggggaggagaggtcattgcctgcgggaccccggaggaagtggcc
ctctcgtcgcgctcccacaccggccgctatctccgtccctacctgcacctctag

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