Desulfuromonas soudanensis: DSOUD_0370
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Entry
DSOUD_0370 CDS
T04049
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
des
Desulfuromonas soudanensis
Brite
KEGG Orthology (KO) [BR:
des00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
des03016
]
DSOUD_0370
Enzymes [BR:
des01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
DSOUD_0370
Transfer RNA biogenesis [BR:
des03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
DSOUD_0370
Prokaryotic type
DSOUD_0370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
HTH_8
Motif
Other DBs
NCBI-ProteinID:
ALC15165
UniProt:
A0A0M4CXZ0
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All DBs
Position
404661..405659
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AA seq
332 aa
AA seq
DB search
MRSVFYPTLVNGPFGDPALYVRLAHRGEALLFDCGDLHSLSTRQILKLSAVFVSHGHIDH
LIGFDLLLRNFLCSRRPLLLYGPPGFAAQIGHRLAGYTWNLIESYPLTVIVREWGEEAGV
EVRFRAAGGFRAEAGRDWLCFGGILMETPVWRVRCIPLDHGGIVSLAFLLEEPLHVAVHK
DALESRGYAPGPWLNRFKDRVRQGDGGGEVVSVPLAAGGSQAVELEELCRQIAHTERGMK
VCYVTDASPSEKNLRAIEALAADAHLLAIEATFARRDHSRAVERNHLTAALAGEIGRRAR
AARLLVFHHSPRYLDFPQLLRLEAEEAFGGGT
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcgatccgtgttctacccaacgctggtcaacggccccttcggcgatccggctctctac
gtgcgcctggctcaccgcggcgaggctctcctcttcgattgcggcgatctccattccctg
agcacccgccaaatcctcaaactctcggctgtcttcgtttcccacggccacatcgatcat
ctgatcggcttcgacctcctgctgcgcaactttctctgcagccggaggcccctgcttctc
tacggtccgccggggtttgctgcccagatcggtcaccgcctggccggctacacctggaac
ctgatcgagagctatccgctgacggtaattgtgcgcgagtggggagaggaggcgggggtc
gaagtccgtttccgggcggccggggggtttcgggccgaagcggggcgggactggctctgc
ttcggcgggatcctcatggagactccggtctggcgggtgcggtgtatccccctggaccac
ggcggaatcgtctcgctggccttccttctcgaggagccgctgcacgtggcggtgcacaag
gacgccctggagagccgcggctacgcccccggtccctggctgaatcgcttcaaggaccgg
gtgcggcagggggacgggggaggggaggtcgtctccgtcccccttgccgccggcgggtcg
caggcggtggagctggaggaactctgccggcagatcgcccataccgagcggggaatgaag
gtctgctacgtgaccgacgcctccccctcggaaaaaaacctccgggcgatcgaggcgttg
gcggccgacgcccacctcctggcgatcgaagccaccttcgctcggcgcgaccattcccgg
gcggtggagcgcaaccatctcaccgccgccctggccggagaaatcggccgcagggcgcgg
gcggcgcgcctcctggtctttcatcattctccccggtacctcgatttcccccagttgctg
cggctcgaggctgaagaagcctttgggggcggcacttga
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