Desulfuromonas soudanensis: DSOUD_0425
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Entry
DSOUD_0425 CDS
T04049
Name
(GenBank) murein L,D-transpeptidase YcbB/YkuD
KO
K21470
L,D-transpeptidase YcbB
Organism
des
Desulfuromonas soudanensis
Brite
KEGG Orthology (KO) [BR:
des00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
des01002
]
DSOUD_0425
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
des01011
]
DSOUD_0425
Peptidases and inhibitors [BR:
des01002
]
Cysteine peptidases
Family C82
DSOUD_0425
Peptidoglycan biosynthesis and degradation proteins [BR:
des01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
DSOUD_0425
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GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ALC15220
UniProt:
A0A0M4DFE6
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All DBs
Position
complement(464474..466207)
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AA seq
577 aa
AA seq
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MGRYRAAIAGFILALATVVATATASDRSMNAALGLALQERFPLPFTVAANPSLPDAALQQ
FYFDRDDDPAWFTPAGLVPEAAILTERLSAAAEEGLCPDAYFLAEIEELREYAAETQSHR
LIEDQRRLARLDLRLSEAFLTYAAHLIHGRVDPATVHRDWHANLRQVDLAGLLEFALAEG
RMKTILDDLVPPHPGYRDLRRALADYRRISALGGWETLPGSVTLRPGDFDPRVPALRRRL
AHSGDLGEGAGAETLYDAETAANLRNFQRRHGLSADGVLGPSTLEELNRPVEERIRQLEV
NLERWRWLPKTLGERYIQVNIADLALSAVDKGQTVLTLPVVVGNAYRKTPVFSASLQYLV
FAPYWFVPPTIFKVDKLPRLRADPDYLEKHHFEVVAADRRQALLPLEGINWKEVRAESFP
GLLRQSPGPWNPLGRVKFIFPNPFAIYLHDTPDRHLFASERRAFSSGCIRVERPLELARL
LLQDQRQGDPRRLLAAMEAEEPQRIDLLRPWPIHILYFTAWSDEEGEVNFRRDLYWRDLA
LEEALTTATAPRMAPAPPLAGLPESPPQPPTFFQVEH
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgggacggtatcgggcggcaatagcggggtttattctggcactggccacggtggtcgcc
acggcgacggcctccgaccgctccatgaatgcagccctcggcctcgcccttcaggaacgt
ttccccctcccctttaccgtcgccgccaacccgtccctccccgatgccgcactgcaacag
ttctacttcgacagggacgacgacccggcgtggttcacccccgcggggctcgtccccgag
gccgccatcctcacggagcgactctccgccgccgccgaagagggtctctgccccgacgcc
tatttcctcgccgaaatcgaagaactgcgggagtacgccgccgaaacccaaagccaccgg
ctgatcgaggaccaaagacgccttgcccgactcgatcttcggctgagcgaggccttttta
acctacgccgcccatctgatccacggccgcgtcgacccggcgacggttcacagggactgg
cacgccaatctgcgccaggtcgaccttgccgggcttctcgaattcgccctggccgagggg
aggatgaaaaccatcctcgacgacctcgtccctccccaccccggctatcgcgacctgcgg
cgcgccctcgccgactatcggcgcatttcggctctcggcggctgggagaccctccccggc
agcgtcaccctccgcccgggggatttcgatccccgggtgccggcactgcggcggcgcctg
gcccacagcggcgatctgggggagggagccggagctgagactctttacgatgcggagacg
gcggccaatctgcggaattttcaacgacggcacgggctgtcggccgacggggttctcggc
ccgtcgaccctcgaagagctcaaccgaccggtcgaagagcggatccgccagctcgaagtc
aacctcgaacgctggcgctggctccccaagaccctcggcgagcgctacattcaggtcaac
atcgccgatctggccctgagtgccgtggacaagggtcaaacggtcctcaccctgccggtg
gtcgtcggcaacgcctatcgcaagaccccggtcttctccgccagcctgcaatatctggtc
ttcgccccctactggttcgttccgccgaccattttcaaggtcgacaaactcccccgcctg
cgcgccgaccccgactatctggaaaaacaccatttcgaagtcgttgccgccgaccgcagg
caggcgctcctccctctcgaagggatcaactggaaagaggtccgcgccgaatcgttcccg
ggattactgcgccagtccccgggtccctggaaccccctgggacgggtcaagttcattttt
cccaatccctttgccatctatctccacgacactccggaccgccacctctttgcctccgaa
aggcgcgccttcagctcgggatgcatccgcgtcgagcgtcctctcgaactcgcccggctc
ctgctgcaggatcagcggcagggggaccctcgccgcctcctcgccgccatggaggccgag
gagccgcaaaggatcgaccttctccgcccctggccgatccacatcctctacttcaccgcc
tggtctgacgaagaaggagaggtcaattttcgccgcgacctctactggcgggacctggcc
ctcgaagaggccttgacaacagcgaccgccccccggatggcgccggcgccccccctggcc
ggtctcccggaaagccccccccaaccgccgaccttttttcaggtcgaacactga
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