Desulfuromonas soudanensis: DSOUD_0503
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Entry
DSOUD_0503 CDS
T04049
Symbol
cafA
Name
(GenBank) RNAse G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
des
Desulfuromonas soudanensis
Brite
KEGG Orthology (KO) [BR:
des00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
des03019
]
DSOUD_0503 (cafA)
03009 Ribosome biogenesis [BR:
des03009
]
DSOUD_0503 (cafA)
Messenger RNA biogenesis [BR:
des03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DSOUD_0503 (cafA)
Ribosome biogenesis [BR:
des03009
]
Prokaryotic type
rRNA processing factors
DSOUD_0503 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
DUF5351
Motif
Other DBs
NCBI-ProteinID:
ALC15294
UniProt:
A0A0M5IYF4
LinkDB
All DBs
Position
complement(574420..575928)
Genome browser
AA seq
502 aa
AA seq
DB search
MAKELVINTTAHETRVALLENGHIAELYIERNRERGIVGNIYLGKVIRVLPGMQAAFVDI
GLEKAAFLYVADVLDEMEAVEQLIEGRNQHGNASGEDDERPPLPPIEDLLQERQEILVQI
AKEPIGTKGARITAHISLPGRHLVYMPTVDHIGISRRIDNEEEKDRLRGIIEKIRPPGTG
FIVRTASEGKSEEDLVSDMGFLIGLWEEVLRNRENRSAPSLIHSDLDVTSKVLRDTLTEE
VDRIVVDTKEEYEKIVRFIDTFVPKLKYAIELYEDDEPIFDAFGLEIEIARALGRKVWLK
SGGYIIIEQTEALVAIDVNTGRYVGKHNLEDTILKTNLEALKEIAFQLRLRNIGGLIIID
FIDMEKELHREKVHSSLEEALKSDKSKTNILKISELGLVEMTRKRVRESIGRTLCEPCPY
CEGKGYIKSRTTMVYEIFRELRREIRDLPGYRVTLLVNPDIAALLSDEEHGGIEELERRF
EKQITINARPGFHQEQFELMIG
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagagctggtcatcaacaccaccgcccacgaaacccgggtggcgctgctggag
aacgggcacatcgccgaactctacatcgagcgcaaccgggaacgggggatcgtggggaac
atctatctggggaaagtgatccgcgttctccccggcatgcaggcggccttcgtcgacatc
ggcctggaaaaggcggcctttctctacgtcgccgacgtcctcgatgaaatggaagcggtc
gagcaactcatcgaggggcgaaaccagcacggcaacgcctccggagaagacgacgaacgc
ccccccctcccccctatcgaggacctcctgcaggagaggcaggagatcctggtgcagatc
gccaaggagccgattggcaccaagggggcccggatcaccgcccacatctccctcccgggg
cgccacctggtctacatgccgaccgtcgaccacatcggcatctcccgacgcatcgacaac
gaggaggagaaggaccggctgcgggggatcatcgaaaagatccgtccgccggggaccggc
ttcatcgtccgtaccgcctcggaggggaagagcgaggaggacctggtcagcgacatggga
tttctcatcggcctctgggaggaggtccttcgcaaccgggaaaaccgctcggcgccctcc
ctgatccactcggacctcgacgtcaccagcaaggtcctgcgcgacaccctgaccgaggag
gttgatcgcatcgtcgtcgacacgaaggaggaatacgagaagatcgtccgcttcatcgac
accttcgtccccaaactcaagtacgccatcgaactctacgaggacgacgaaccgatcttc
gacgccttcggtctcgagatcgaaatcgcccgcgccctcggacgcaaggtctggctcaag
agcggcggctacatcatcatcgagcagaccgaggccctggtcgccatcgacgtcaacacg
gggcgttacgtcggcaagcacaacctcgaagacaccatcctcaagaccaatctcgaggcg
ctcaaggagatcgcctttcagctccgactgcgcaacatcggcggcctgatcatcatcgat
ttcatcgacatggagaaggaactccaccgcgagaaggtgcactcctccctcgaagaggcg
ctcaagagcgacaagagcaagaccaacatcctgaagatttccgaactcggcctggtggaa
atgacgcgcaagcgggttcgggagagcatcggccgcaccctctgcgagccgtgcccctac
tgcgaggggaaggggtacatcaagagccgcaccaccatggtctacgaaatcttccgcgag
ctgcgccgggaaatccgcgacctccccggctaccgggtgacgttgttggtcaaccccgac
atcgccgccctcctctccgacgaggagcatggggggatcgaggagctcgagcggcgcttc
gaaaagcagatcaccatcaacgcccgccccgggttccaccaggagcagttcgagctgatg
atcggctga
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