Desulfuromonas soudanensis: DSOUD_0728
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Entry
DSOUD_0728 CDS
T04049
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
des
Desulfuromonas soudanensis
Brite
KEGG Orthology (KO) [BR:
des00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
des03032
]
DSOUD_0728 (topA)
03400 DNA repair and recombination proteins [BR:
des03400
]
DSOUD_0728 (topA)
Enzymes [BR:
des01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DSOUD_0728 (topA)
DNA replication proteins [BR:
des03032
]
Prokaryotic type
DNA Topoisomerases
DSOUD_0728 (topA)
DNA repair and recombination proteins [BR:
des03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DSOUD_0728 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
RNR_Alpha
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ALC15516
UniProt:
A0A0M4CV36
LinkDB
All DBs
Position
complement(843308..845746)
Genome browser
AA seq
812 aa
AA seq
DB search
MAQTLVIVESPAKAKTIEKFLGKGFKVLASYGHVRALPSKQGSVDIANDFEPKYHILPES
KKHVDLLKKEAARSSELILATDLDREGEAIAWHLLEALEISEESTSPVVKRVTFHEITKK
AILKAMEEPRHIARDLVDAQQARSILDYLVGFNLSPFLWKKIRYGLSAGRVQSVALRLIC
DREKEIQGFDPREYWTIEADMATERKEPFRARLHAVGGERLDKFAIATTAEAEALVADLE
KSRFAVTSVARSEKKRNPAAPFTTSTLQQEASRKLGFSARKTMTTAQKLYEGIDIGQGDV
GLITYMRTDSVALSEEATDEAREVITRVFGKEYALEKPRVYKSKAKNAQEAHEAVRPTAI
INTPDKVKPFLSSDQHRLYSLIWTRTVASQMASAILDATTVDIGSTPGAPREFTFRASGQ
VIRFPGFMKLYIEGTDEAEEKAEGLLPLINEGEGVERGELYPEQHFTQPPPRYTEASLVK
TLEEYGIGRPSTYASIMNTLVTRKYVRLEKRAFFPEDVGMVVSDLLVKHFHQYVDYDFTA
KLEEDLDAISRGEEQWRPVLRGFWDPFIALLKQKEQEVSKEDVTTEKTDKLCPECSKPLV
VKLGRSGKFLACSGFPECRHTEPLSGEEQEEPVLSEEKCDKCGAPMLIKMGRFGKFLACS
AYPACKNIQPLIKPKALGITCPECKEGEMMEKKSRYGKIFYSCNRYPQCKYALWDLPINE
PCPKCGHPVIVEKVTKRDGTYRKCPTETCDYRLVLVEPEKKAAAKKAPAKAPADKKEPVK
KAPAKKAPTKTTAAAGAVPRKVAVPAKKKKPE
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaccctcgtgatcgtcgaatcgccggccaaggcaaaaaccatcgagaaattt
ctcggcaaggggttcaaggtcctggcctcctacggccatgtgcgcgccctccccagcaag
cagggatcggtggacatcgccaacgacttcgaacccaaataccatatcctccccgagagc
aagaagcacgtcgacctgctgaaaaaggaagccgcccgcagctccgaactgatcctcgcc
accgacctcgaccgcgaaggggaagccatcgcctggcacctgctcgaagccctggagatc
tccgaagagagcacctccccggtcgtcaagcgggtcacctttcacgagatcaccaaaaag
gcgatcctcaaggcgatggaggaaccgcggcacatcgcccgcgacctcgtcgacgcccag
caggcccgatcgatcctcgactacctggtcggcttcaacctctcccccttcctgtggaag
aagatccgttacggactctccgccggacgggtgcagtcggtggccctgcgcctgatctgc
gaccgggaaaaggagatccagggcttcgacccccgggaatactggaccattgaagccgac
atggcgacggagcgcaaagaaccgttccgcgcccgcctgcacgccgtcggcggcgaaagg
ctcgacaagttcgccatcgccacgacggccgaggccgaagctctggtggccgatctcgaa
aagtcccgcttcgccgtgacttcggtggcgcgcagcgaaaagaagcgtaaccccgccgcc
cccttcaccaccagcaccctgcagcaggaagcgagccgcaaactcggcttctccgcccgc
aagacgatgaccaccgcccagaaactctacgaggggatcgacatcggccagggggacgtc
ggcctgatcacctacatgcggaccgactccgtcgccctctccgaagaggcgacggacgag
gcgagagaggtcatcacccgggtcttcggcaaggagtacgccctggagaaaccgcgggtc
tacaagagcaaggcaaaaaacgcccaggaggcccacgaggcggtgcggccgacggcgatc
atcaacaccccggacaaggtcaagccctttctcagctcggaccagcatcgcctctacagc
ctgatctggacccgcaccgtcgcctcgcagatggcctcggccatcctcgacgccaccacc
gtcgacatcggctcgacccccggcgccccccgggagttcaccttccgcgcctcgggccaa
gtgatccgcttccccggcttcatgaagctctacatcgaggggaccgacgaggccgaggag
aaggccgaggggcttctccctctcatcaacgagggggaaggagtcgagcgaggggagctt
tatcccgagcagcacttcacccagccccctccccgctataccgaagcgagcctggtcaag
accctggaagaatacggcatcggccgcccctcgacctacgcctcgatcatgaacaccctg
gtgacccgcaagtacgtgcgcctggaaaaacgcgccttctttcccgaggacgtcggcatg
gtggtcagcgacctcctcgtcaaacacttccatcagtacgtggactacgacttcaccgcc
aagctcgaggaggacctcgacgccatctcccgcggcgaagagcagtggcgcccggtgctg
cgcggcttctgggatcccttcatcgccctcctcaagcagaaggagcaggaagtctccaag
gaggacgtcaccaccgagaagaccgacaagctctgccccgaatgcagcaagccgctggtg
gtcaagctcgggcgctcggggaagtttctcgcctgctccggatttcccgaatgccgccac
accgagcccctctccggcgaggagcaggaagaaccggtcctctccgaggagaaatgcgac
aaatgcggggcgccgatgctcatcaagatgggacgtttcggcaagtttctcgcctgcagc
gcctatccggcctgcaagaacatccagcccctgatcaagccgaaggccctcggcatcacc
tgccccgaatgcaaggaaggggagatgatggagaagaagagccgctacggcaagatcttc
tactcctgcaaccgctatccgcagtgcaagtacgccctctgggacctgccgatcaacgaa
ccctgccccaagtgcggccatccggtgatcgtcgaaaaagtcaccaagcgcgacggcacc
taccgcaaatgccccaccgagacctgcgactaccgcctggtgctggtggagccggagaaa
aaggcggcggccaaaaaggcaccggccaaagcgccggcagacaagaaggaaccggtcaag
aaagcgccggctaagaaggcgccgaccaaaacgacggctgccgcgggagctgtacccagg
aaagtcgccgtcccggcgaagaagaaaaaaccggaatga
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