Desulfuromonas soudanensis: DSOUD_0933
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Entry
DSOUD_0933 CDS
T04049
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
des
Desulfuromonas soudanensis
Brite
KEGG Orthology (KO) [BR:
des00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
des03016
]
DSOUD_0933
Enzymes [BR:
des01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
DSOUD_0933
Transfer RNA biogenesis [BR:
des03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
DSOUD_0933
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
DUF3618
Motif
Other DBs
NCBI-ProteinID:
ALC15719
UniProt:
A0A0M3QF73
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All DBs
Position
complement(1041523..1042083)
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AA seq
186 aa
AA seq
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MSQIRAFLAVPLPPDLQRQIARLQNRLAETLPDVRWVRPGTIHLTLKFFGELPEESLDRI
GEVVLSIGHLSVPFQARLIGVGAFPSPLRPRVIWLGVDGGPPLAKLQDDLESALEKIGIP
RDDRPFTPHLTLGRRRGTALAEKCDLAPFKDATCGELVVDSLVLFESRLEPGGALHLPRK
TVGLGR
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaattagagccttcctcgccgtccccctccccccggacctgcagcggcagatt
gcccggctccagaatcgcctggccgaaacccttccggacgtccgctgggtccgccccggg
acgatccatctgactctcaagtttttcggcgaactcccggaagaatcccttgataggata
ggggaagttgtgctatcgatagggcatttgagcgtcccctttcaggcacggttgatcgga
gtcggagcctttccttcaccgctgcgaccaagagtgatctggctcggcgtcgacggcggc
cctcccctggcaaaactgcaggacgacctggagtcggcactggagaaaatcggcattccc
cgcgacgatcgtcccttcactccccacctgaccctgggccgccggcgcgggacggccctc
gccgaaaagtgcgacctggccccctttaaggatgcgacctgcggggagctcgtcgtcgat
tcgctggtcctctttgaaagccgcctggaaccgggcggcgctttgcatctgccgcggaaa
accgtcggcctcggccgctga
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