KEGG   Desulfuromonas soudanensis: DSOUD_0933
Entry
DSOUD_0933        CDS       T04049                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
des  Desulfuromonas soudanensis
Brite
KEGG Orthology (KO) [BR:des00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:des03016]
    DSOUD_0933
Enzymes [BR:des01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     DSOUD_0933
Transfer RNA biogenesis [BR:des03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    DSOUD_0933
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 DUF3618
Other DBs
NCBI-ProteinID: ALC15719
UniProt: A0A0M3QF73
LinkDB
Position
complement(1041523..1042083)
AA seq 186 aa
MSQIRAFLAVPLPPDLQRQIARLQNRLAETLPDVRWVRPGTIHLTLKFFGELPEESLDRI
GEVVLSIGHLSVPFQARLIGVGAFPSPLRPRVIWLGVDGGPPLAKLQDDLESALEKIGIP
RDDRPFTPHLTLGRRRGTALAEKCDLAPFKDATCGELVVDSLVLFESRLEPGGALHLPRK
TVGLGR
NT seq 561 nt   +upstreamnt  +downstreamnt
atgtcgcaaattagagccttcctcgccgtccccctccccccggacctgcagcggcagatt
gcccggctccagaatcgcctggccgaaacccttccggacgtccgctgggtccgccccggg
acgatccatctgactctcaagtttttcggcgaactcccggaagaatcccttgataggata
ggggaagttgtgctatcgatagggcatttgagcgtcccctttcaggcacggttgatcgga
gtcggagcctttccttcaccgctgcgaccaagagtgatctggctcggcgtcgacggcggc
cctcccctggcaaaactgcaggacgacctggagtcggcactggagaaaatcggcattccc
cgcgacgatcgtcccttcactccccacctgaccctgggccgccggcgcgggacggccctc
gccgaaaagtgcgacctggccccctttaaggatgcgacctgcggggagctcgtcgtcgat
tcgctggtcctctttgaaagccgcctggaaccgggcggcgctttgcatctgccgcggaaa
accgtcggcctcggccgctga

DBGET integrated database retrieval system