Desulfuromonas soudanensis: DSOUD_1766
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Entry
DSOUD_1766 CDS
T04049
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
des
Desulfuromonas soudanensis
Pathway
des03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
des00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSOUD_1766 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
des03019
]
DSOUD_1766 (pnp)
03016 Transfer RNA biogenesis [BR:
des03016
]
DSOUD_1766 (pnp)
Enzymes [BR:
des01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DSOUD_1766 (pnp)
Messenger RNA biogenesis [BR:
des03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DSOUD_1766 (pnp)
Transfer RNA biogenesis [BR:
des03016
]
Prokaryotic type
tRNA degradation factors
DSOUD_1766 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
SMC_ScpB
KH-I_KHDC4-BBP
KH_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ALC16544
UniProt:
A0A0M5IZ08
LinkDB
All DBs
Position
1918801..1920891
Genome browser
AA seq
696 aa
AA seq
DB search
MAFQKVEIEFNGQPLTIETGKMARQADGATVITYGDTKVLCTAVSGHKIREGQDFFPLTV
NYQEKFYAAGKIPGSFFRRERGTTERETLICRLIDRPMRPLFPKGYLFETQIMPTVISAD
LVNDPDTLAMVAASASLVVSDIPFFGPIAAVRVGRVDGKLIANPTLQQMPESDLEIIVSG
SREAVMMVEGEANLVSEDDMLEAIFFGHQALQPLIDMQLELQKLVGKAKRAFAVAEVDSA
LEAKVAALATDKLAETAKIRTKQERYAAIDQVKTDVQQALAGEFEGRQGEISSILGSIGK
RVMRQMVTRDRIRIDGRDMKTVRPITCEVGNLPRAHGSSLFTRGETQALVAIALGTTSDE
QRMDNLQGMEFKKFMLHYNFPPFSVGETSMRLFPGRREIGHGMLAERSVAKVLPKHEDFP
YTIRIVSDILESNGSSSMASVCGSSLSLMDAGVPITEAVAGIAMGLIKEGDNVAVLSDIL
GDEDHLGDMDFKVTGTANGIAALQMDIKITGVDRAIMKQALEQAKEGRLHILKEMAKALT
APRADLSPYAPRITTIYVKSDQVRTVIGSGGKNIRGIIEATGCSIDIEDDGRINIASADG
DACQKAIKMIRDLTQEAEVGKLYMGTVRKIMEFGAFVEIYPGTDGLVHVSELDTERVRNV
SDILKEGDEVLVKCIGIDKQGKIKLSRKEALGQTLP
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggcttttcaaaaagtcgagatcgaattcaatggtcaaccgctgaccatcgaaacagga
aaaatggcccgccaggccgacggtgcaactgtcatcacttatggcgacaccaaggtcctc
tgtactgccgtctcagggcacaaaatccgcgaagggcaggattttttccccctgaccgtc
aattaccaggaaaaattctatgcggcagggaagattcccggctcctttttccgccgggag
cggggaacgaccgagcgtgagaccctgatctgccgtctcatcgaccgtcccatgcgtccc
ctttttcccaaaggatatctcttcgaaacccagatcatgccgacggttatttccgccgat
ctggtaaacgatccggataccctggccatggtcgccgcttcggcatccctcgtggtttcc
gatatcccttttttcggccccatcgctgcggttcgcgtcggccgcgtcgacggcaagctg
attgccaacccgacactgcaacagatgcctgaaagcgatctcgaaatcatcgtttccggt
tcccgtgaagccgtcatgatggtcgagggtgaggccaatctggtttccgaagacgacatg
ctcgaggcgatcttcttcgggcatcaggcgctgcaaccgctgatcgacatgcagcttgag
ctgcagaaactcgtcggcaaggccaagcgcgcattcgccgtcgcggaagtcgacagcgct
ctcgaagccaaggtagcggccctggccaccgacaaactggccgagaccgccaagattcgc
accaaacaggaacgttacgccgccatcgatcaggtcaaaactgatgttcagcaggcgttg
gccggcgaattcgaaggacgccagggagagatttcctccatcctcggctccatcggcaag
cgcgtgatgcgccagatggtaacccgggatcgcattcgcatcgatggccgcgacatgaag
accgtccggcccatcacctgtgaagtcggcaatcttccccgcgctcacggcagttccctc
ttcacccgcggcgagacccaggccctggtcgctatcgctctcggaacgacttcggacgag
cagcgcatggacaaccttcaggggatggagttcaagaagttcatgcttcattacaacttc
cctcccttctccgtcggcgaaaccagcatgcgcctcttccccgggcgtcgcgaaatcggt
cacggcatgcttgccgagcgttcggtggccaaggttctccccaagcacgaggattttccc
tacaccatccgtatcgtctccgacatcctcgagtccaacggctcctcgtccatggccagt
gtctgcggatcctcactctccctgatggacgccggtgttccgatcaccgaagccgtggcc
ggaatcgccatgggcctgatcaaggaaggcgataacgtcgctgttctctccgatatcctc
ggtgacgaggatcacctcggcgacatggatttcaaggtgaccgggaccgccaacgggatc
gccgctctgcagatggacatcaagatcaccggcgtcgaccgggcgatcatgaagcaggcc
ctcgagcaggccaaggaagggcgccttcacatcctgaaggaaatggcaaaggcactgacc
gcaccccgcgccgatctctccccctacgcgccgcggatcaccaccatctacgtcaagagc
gatcaggttcgtacggtcatcggttccggcggcaagaacatccgcggcatcatcgaggcc
accggttgctccatcgatatcgaggacgacgggcgaatcaatatcgcctcagctgatggc
gatgcctgccagaaagcaatcaagatgattcgcgatctgactcaggaggccgaagtcggc
aagctgtacatgggaacggtccggaagatcatggagtttggcgccttcgtcgaaatctac
cccggcaccgacggcctcgtccacgtctccgagctcgacaccgagcgggtgcgcaacgtc
agcgacatcctcaaggaaggggatgaggttttggtgaaatgtatcggcatcgacaaacag
gggaagatcaaactctcccgcaaagaggctcttggtcagactcttccctga
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