Desulfuromonas soudanensis: DSOUD_1903
Help
Entry
DSOUD_1903 CDS
T04049
Symbol
ihfB-1
Name
(GenBank) DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
des
Desulfuromonas soudanensis
Brite
KEGG Orthology (KO) [BR:
des00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
des03032
]
DSOUD_1903 (ihfB-1)
03036 Chromosome and associated proteins [BR:
des03036
]
DSOUD_1903 (ihfB-1)
03400 DNA repair and recombination proteins [BR:
des03400
]
DSOUD_1903 (ihfB-1)
DNA replication proteins [BR:
des03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DSOUD_1903 (ihfB-1)
Chromosome and associated proteins [BR:
des03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DSOUD_1903 (ihfB-1)
DNA repair and recombination proteins [BR:
des03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DSOUD_1903 (ihfB-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ALC16674
UniProt:
A0A0M5IL27
LinkDB
All DBs
Position
complement(2054431..2054712)
Genome browser
AA seq
93 aa
AA seq
DB search
MNKSELVEALANEKNLTFKKSEEIVNIIFDSLSSELIRGGRIEIRGFGSFVVKDYKAYMG
RNPKTGEVIQVNPKKLPFFKVGKELRERVDAKN
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatcggaactagtagaggccctggccaacgaaaagaacctgacattcaaaaaa
tccgaggaaatcgtcaatattatcttcgattccctgagcagtgaactgatccggggcggg
cgcatcgaaattcgtggatttggcagttttgtcgtcaaagattacaaggcctatatgggc
cgcaatccgaaaaccggggaagtcattcaggtcaatccgaaaaaactcccctttttcaaa
gtcggcaaggagttgcgcgagcgggtcgacgcgaaaaattaa
DBGET
integrated database retrieval system
