Desulfuromonas soudanensis: DSOUD_3202
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Entry
DSOUD_3202 CDS
T04049
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
des
Desulfuromonas soudanensis
Pathway
des03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
des00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSOUD_3202 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
des03021
]
DSOUD_3202 (rho)
03019 Messenger RNA biogenesis [BR:
des03019
]
DSOUD_3202 (rho)
Transcription machinery [BR:
des03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DSOUD_3202 (rho)
Messenger RNA biogenesis [BR:
des03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DSOUD_3202 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
AAA_25
OB_RNB
AAA
S1CSD-TOTE-2
NACHT
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
ALC17925
UniProt:
A0A0M4DK91
LinkDB
All DBs
Position
complement(3516064..3517311)
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AA seq
415 aa
AA seq
DB search
MNLKELKEKKATELAALAKELKVEGAPGMRKQDLIFAILNATAEKNGAIFGEGVLEILPD
GFGFLRAPDANYLPGPDDIYVSPSQIRRFNLRTGDTVSGQIRPPKEGERYFALLKVSEVN
FENPAVAKDKTLFDNLTPLYPEERVILETTSDNLPMRVMDLASPIGKGQRGLIVAPPRTG
KTMLLQNIANSITANHPEVYLIVLLIDERPEEVTDMLRSVNGEVISSTFDEPATRHVQVA
EMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVVPPSGKILSGGVDSNALHKPKRFFGA
ARNIEEGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELHLDRRLVEKRTFPAIDINKS
GTRREELLIDRTSLQRIWLLRKVLSSMNVVDSMEFLLEKLGESKSNQEFLDSMNR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgaaggaactgaaagagaaaaaagccaccgaacttgcggctcttgccaaggaa
ttgaaggtggagggggctccgggaatgcgcaagcaggacctgatcttcgccatactcaat
gcgaccgccgagaaaaacggggctattttcggcgagggggtactggaaatcctccccgac
ggcttcggtttccttcgggctcccgatgccaactatcttccggggccggacgatatctac
gtttccccctcccagatccgccggttcaatctgcgcaccggcgacacggtctccggtcag
atccgtccccccaaagagggagagcgctacttcgccctcctcaaggtctccgaggtcaac
ttcgaaaatcccgccgtcgccaaggacaagaccctcttcgacaacctcacccccctctac
cccgaggaacgggtcattctcgagacgacctcggacaacctgccgatgcgggtcatggat
ctggcctcccccatcggcaagggacagcgcggcctgatcgtcgccccgccccggaccggc
aagacgatgctgctgcagaacatcgccaattccatcaccgccaaccatccggaagtctat
ctcatcgtcctcctcatcgacgagcgccccgaggaggtcaccgacatgctccgctcggtg
aacggggaggtcatctcctcgaccttcgacgagccggccacccgccacgtccaggtggcc
gagatggtcattgagaaggccaagcgtctggtggagcacaagcgcgacgttgtcatcctg
ctcgattccatcacccgcctggcccgggcctacaacaccgtcgtccccccttcggggaag
atcctctccggcggcgtcgactccaatgccctccacaagcccaagcgcttcttcggcgcg
gcccgcaacatcgaggagggggggagcctgaccatcattgccaccgccctcatcgatacc
ggcagcaagatggacgaagtcatcttcgaggaattcaaggggaccggcaacatggagctc
catctcgaccggcgcctcgtcgagaagcggaccttccccgccatcgacatcaacaaatcg
gggacccgccgcgaggagctcctcatcgatcgcaccagcctgcagcggatctggctgctg
cgcaaggtcctctcgagcatgaacgtcgtcgacagcatggagtttctgctcgagaagctc
ggggagtccaagagcaatcaggaatttctcgattcgatgaatcgttag
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