Desulfuromonas soudanensis: DSOUD_3456
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Entry
DSOUD_3456 CDS
T04049
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
des
Desulfuromonas soudanensis
Pathway
des03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
des00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSOUD_3456 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
des03019
]
DSOUD_3456 (pcnB)
Enzymes [BR:
des01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
DSOUD_3456 (pcnB)
Messenger RNA biogenesis [BR:
des03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DSOUD_3456 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
PolyA_pol_arg_C
Motif
Other DBs
NCBI-ProteinID:
ALC18173
UniProt:
A0A0M3QGP7
LinkDB
All DBs
Position
complement(3814325..3815644)
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AA seq
439 aa
AA seq
DB search
MTDSETDQFPAANLPRVLPRAEHGISRKQIDDQTLKVLYRLHNNGFKAYLVGGGVRDLLL
GRTPKDFDVGTDATPSQVKKLFRNCFLVGRRFRLAHIRFGQDGLVEVATFRRQAGPDDLP
ENPDDHFGFAENIFGTPQEDAFRRDFTINALFYNIEDFSIIDYVGGLDDLEARRLRVIGD
PLVRFTEDPVRMLRALEFSARLAFTLDEEVREAIYRRAPLIAEAAPARIREEMMELFRHR
VGGEVLRNAQATGLLPHLLAGFEGEEETFSLLEKVDARTASGKAIDEPFVLAALHLHRFR
GACPAGEELTVADAVRIAGLVLAPHCNYFHIAHGVRHQARELLVGFYRLGRGRGMRGERR
FLQHPAFRGALEFLALWSEATGEGVELVARWQEVPESGPSEGRPRGEEGKTPSKGRPRRR
RRGPRRKGVAPAAPPESGE
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaccgattccgaaaccgaccaattccccgcggcaaatctcccccgggttcttccccgc
gccgagcatggcatctcccgcaagcagatcgacgaccagaccctcaaggtcctctatcgg
ctgcacaacaacggcttcaaggcctatctcgtcggcggaggggtgcgcgacctcctcctc
gggcgcacccccaaggatttcgatgtcggcaccgacgcgacgccgagccaggtcaagaag
ctcttccgcaactgttttctcgtcggccggcgcttccgcctcgcccacatccgcttcggg
caggatggtctggtcgaggtggccactttccggcggcaggccggacccgacgacctcccg
gagaatcccgacgaccacttcggcttcgccgagaacatcttcggcaccccgcaggaggac
gccttccgccgggacttcaccatcaacgccctcttctacaacatcgaggacttctccatc
atcgattatgtcggcggcctcgacgacctggaggcgcggcggctgcgggtgatcggcgat
cccctggtgcgctttaccgaggatccggtgcggatgctgcgcgccctggagttctccgct
cgcctcgccttcactctcgatgaggaagtccgggaggcgatctaccggcgcgcccccctg
attgccgaggcggccccggcgcggatccgcgaagaaatgatggaactcttccgccacagg
gtgggaggggaggtgctgcgcaatgcccaggccaccggactcctccctcatctcctggcg
gggttcgagggggaggaggagaccttctccctcctcgaaaaagtcgatgcccgcaccgcc
tcggggaaggcgatcgacgagcccttcgttctggcggctctccacctccaccgtttccgc
ggcgcctgcccggccggcgaggagctgaccgtcgccgatgcggtgcgcatcgccgggctg
gtgctggcaccccactgcaattacttccatatcgcccacggtgtccgccatcaggcccgc
gagctcctggtcggtttctaccgtctcggtcgcggccgcgggatgcgcggcgagcgccgt
tttctccagcacccggccttccgcggggctctggagttcctggctctgtggagcgaggcg
acgggcgagggggtggagcttgtggcccgctggcaggaggtgccggaaagcggcccctcc
gaagggcgccccaggggtgaggagggaaaaacgccgtccaaggggcgtccccgtcgccgc
cgccgcggcccgcgccgcaagggagtcgctcccgcagcgcccccggagtccggagaatga
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