Desulfosarcina sp. BuS5: BuS5_01548
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Entry
BuS5_01548 CDS
T10385
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
desb Desulfosarcina sp. BuS5
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
nSTAND3
AAA_14
TniB
Sigma54_activat
IstB_IS21
ATPase_2
NACHT
AAA_23
Zeta_toxin
AAA_7
AAA_18
Roc
NBD_SMAX1
AAA_24
RNA_helicase
AAA_28
AAA_25
AAA_19
ABC_tran
DUF815
T2SSE
AAA_33
Torsin
DNA_pol3_delta2
HOOK
HalX
Motif
Other DBs
NCBI-ProteinID:
WDN88580
LinkDB
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Position
complement(1524033..1526642)
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AA seq
869 aa
AA seq
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MDLNKFTVKCQQALQEAQTKAVNFNHQEVDGEHLILALVEQSDGLVPRLLERMEVPADAF
REKLVQALEKKPRISGSGTEPGKVYITQRLNKLLAQAQAEAKKLKDEYVSVEHILLAFID
EGGQTPTGNILREFNITRDLLLQTLTAIRGHQRVTSADPEGTYEALQKYGRDLVEEARSG
KLDPVIGRDNEIRRVIRILSRKTKNNPVLIGDPGVGKTAIVEGLAHRIVRQDVPEGLKDK
TIFSLDMGALVAGAKYRGEFEERLKAVLQEVKESDGKILLFIDELHTIVGAGKTEGSMDA
GNMLKPMLARGELHCIGATTLDEYRKYIEKDKALERRFQPVVVGEPSVEDTISILRGLKE
RYEVHHGVKIQDGALVTAAVLSNRYVTDRFLPDKAIDLIDEACAMIRTEIDSMPTELDEV
SRRIMQLEIEEAALKKEKDKASKERLKNLQKELAELRTEADAKRAQWESEKQAIKKVQAI
REELEKIRHDIEVAERDYDLNRAAELRHGKLPELERRLKSEEEMLTKKQTAERLLREEVT
EDEIAEIISRWTGIPVTRLMEGERQKILRLDEVLHERVIGQDEAVQLVADAVIRARSGIK
DPRRPIGTFIFLGPTGVGKTELAKTLAEALFDSEENMVRIDMSEYMEKHTVARLIGAPPG
YVGFEEGGQLTEAVRRKPYAVILFDEIEKAHHDVFNVLLQIFDDGRLTDGQGRTVDFKNT
VIILTSNIGSHHLLEGIDRDGQLSEAVKNQVMGELRQHFRPEFLNRVDDIVLFKPLTLDE
VEQIVALLTQDLSRRLAERQINIEISDAARHFIAETGYDPVYGARPLRRFIQRELETRIG
RALIAGEVSDGATLRVDLNDGELGITHES
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaacaaatttaccgtaaaatgccaacaggcccttcaagaagcccagaccaag
gccgtcaatttcaaccaccaggaggttgacggcgagcatttgatcctggcccttgtggaa
caatcggatggattggtgccgcggctgctggaacgtatggaggttccggcagacgcattc
agggaaaagctcgtgcaagcgcttgagaaaaagccgcgcatcagcgggtcgggcacggaa
ccgggcaaggtgtacatcacccagcggctgaacaaactgttggcgcaggcccaggccgaa
gccaaaaaactcaaggacgagtatgtctcggtcgaacatatcctgctggcctttatcgat
gaaggcggccaaaccccgacgggaaatattcttcgtgaattcaacatcacccgcgatctg
ctgctgcaaacactcactgccatccgcggacatcagcgcgtgactagcgccgaccccgaa
ggaacctacgaggcgctgcaaaaatacggccgtgacctggtggaagaggcccggtccggc
aaactcgatccggtcattgggcgtgacaatgagatccggcgggtgatccggattctttcg
cgcaaaaccaaaaacaacccggtcctgatcggtgatcccggcgttggtaaaactgccatc
gtcgaggggttggcccaccgcatcgtgcgccaggacgtgccagaagggctgaaagataaa
actattttttccctggatatgggcgccctggtggccggcgccaagtatcgcggcgagttc
gaggagcggctgaaggctgtcttgcaggaggtcaaggagtctgacgggaaaatcctgctt
ttcatcgacgagctgcataccatcgtgggagcgggcaagacggagggctccatggatgcc
ggcaacatgctcaagcccatgcttgcccggggtgagctgcactgcattggcgccaccacc
ctggacgaataccgcaagtacatcgaaaaggataaggccttggagcgccgttttcaaccg
gtcgtggtcggcgagccttctgttgaagacaccatttcgattttgcggggactcaaggag
cgctacgaggttcatcacggtgtaaagatccaggacggcgccctggtcacggcggcggta
ttatcaaaccggtacgtcacagaccggtttttgccggacaaggccatcgacctgatcgat
gaagcctgcgcaatgatccgtactgaaatcgattccatgcccacggaactggatgaggtg
tcgcgccggatcatgcagctggagattgaagaggcggccttaaaaaaagaaaaagacaag
gcgagcaaggaacgcttgaaaaaccttcaaaaagagctagccgaacttcgaacggaagct
gacgccaaacgtgcccagtgggaatctgaaaaacaggccattaaaaaggtgcaggctatt
cgggaagagctggaaaagatccggcatgacatcgaagtcgccgaacgggactatgacctt
aatcgtgcggcggaattgcggcacggcaaactgcccgagcttgaacgacggttaaagagc
gaagaagagatgctgaccaaaaagcagaccgctgaacgtctgctgcgcgaggaggtcacc
gaagatgagatcgctgaaatcatttcccgctggaccggcatccctgtcactcggctgatg
gaaggcgagcgccaaaaaatattgcggctcgacgaagtgctgcacgaacgcgttatcggt
caggacgaagccgtccagctggtggccgatgccgttatccgggcccgttccggcatcaag
gacccgaggcgacccatcggcacctttattttccttggccctacgggagtcggaaaaaca
gagctggccaaaacgctggccgaggccctgtttgattccgaggaaaacatggtgcgcatc
gacatgagcgaatacatggaaaagcacacggtcgcccgattgatcggtgcccctcccgga
tatgtcggttttgaggaaggcgggcagttgaccgaagctgttcggcgcaaaccctacgcc
gtgattttattcgacgagattgaaaaggcccatcacgatgtgttcaacgtgctgctccag
atttttgacgacggccggctgaccgacggccagggccgaaccgtggatttcaaaaacacc
gtcatcatcctgaccagcaatatcggttcgcaccatctgttggagggaatcgacagggac
ggacaactgagcgaggctgttaaaaaccaggtcatgggcgagttgcgccagcacttccgc
cctgaatttctcaaccgggtggacgatatcgttcttttcaaaccgctgacccttgacgaa
gtcgaacagattgtggccctgctgacacaagatctgtccaggcggttggcggagcgacag
atcaacatcgaaatcagcgatgccgcgcggcatttcatcgccgagacgggctacgacccg
gtgtatggcgccaggccgcttcggcgatttattcaaagggagctggagacccgcatcggc
cgtgccctgatcgctggggaagtgtcggatggcgctaccctgcgtgtggatctgaatgac
ggcgaattgggtatcacccatgagagttga
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