Desulfosarcina sp. BuS5: BuS5_01820
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Entry
BuS5_01820 CDS
T10385
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
Organism
desb Desulfosarcina sp. BuS5
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
DEAD
DUF3223
Motif
Other DBs
NCBI-ProteinID:
WDN88852
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Position
complement(1816817..1818775)
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AA seq
652 aa
AA seq
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MKIKEQIKPADNSGQFNINYEKELNPSQLDAVTSAEGPLLIIAGAGSGKTRTLTYRVAYL
VEKGIPPQSILLLTFTRKASQEMLHRASQLVGARCAMVSGGTFHSFANSVLRTYAKKIGF
GHDFYIMDRSDTESLINIIRKESGYGSKNRSFPRKQTLANIFSRAVNKVLSLEDVVSRDY
PHFFNDLEAIIELNKEYANQKRINNALDYDDLLIFLHLLLKKHPEIRNKLTSLYRYIMVD
EYQDTNPVQAEIVYFLAGDEKNIMVVGDDSQSIYSFRGADFMNIMRFPDVFPSTRIIKLE
ENYRSAQPILDLTNKMIENAATKYSKKLFTNLHGETMPIIINAEDEYAQSEIVVKKIKNL
AEKGIPVNEIAVLFRSGFHSFGLEIELTRNNISFIKMGGFKFMDSAHIKDVIAHLRAFSS
RVDRISWYRILMLLNKIGPAAARKIFKSVSEKGIDAGLSGIKLKGKAAEGIMKLKGLFAK
MDSQSVTVADMGEAVIEYYTPLLETMYDDHHKRRKHLEHLVGIMERYRNMGEFLTDMALE
PPNTVKDDSFTTNPSDKGRLVLSTVHSAKGLEWNTVFVIWTLDGRFPSAYALNNDKDLEE
ELRLMYVAATRAKENLFFIYPQNVYDKSSNSFLCNPSRFLEIIPDDILKKEF
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaagaacaaataaaaccagcggacaattccgggcaatttaatattaattat
gagaaggaacttaatccctctcaacttgatgctgtaacaagtgctgaaggaccgctcctg
attattgcgggtgctggaagtggaaagaccaggactcttacttacagggttgcctacctt
gtggaaaaaggcatccctcctcaatctattctacttctcacatttacaagaaaagcatcc
caggaaatgctgcatcgtgcctcacagctggtaggtgcaagatgcgccatggtttcagga
ggaacttttcattcttttgcaaacagtgtgctgcgaacctacgcaaaaaaaatcgggttt
gggcatgacttctatattatggaccggtcagacaccgaaagtttaataaatattataaga
aaagagtccggctacggctcaaaaaaccgctcattcccaaggaaacagactcttgccaat
attttcagcagggctgtcaataaggttctatccctggaagatgtagtttcccgtgattac
ccgcatttcttcaatgacctggaagcaattattgagctgaataaagaatacgcaaatcaa
aaaagaataaataatgcccttgactatgacgatcttctgatatttttacatctgctttta
aaaaaacacccggaaattcgcaacaagcttacgtcgctgtatcgttacatcatggtagac
gaatatcaggacacaaaccctgtacaggcagaaatagtatacttccttgccggcgatgaa
aagaatattatggttgtaggcgatgattcccagagcatatattctttcaggggagcagac
ttcatgaatataatgagatttcccgatgtttttccttccacaaggataatcaagctggaa
gagaactatcgcagtgctcaacccattcttgaccttacaaacaagatgattgaaaatgca
gcaacaaaatattcaaaaaaactatttacaaatttacacggcgaaaccatgcccattatc
ataaacgctgaggatgaatatgctcaatcagaaattgtagtaaaaaaaataaaaaacctt
gctgaaaaaggtatacccgtaaatgagatagcagtacttttcaggtccggctttcattca
ttcggacttgagatagaactgaccagaaataacatttcttttataaaaatgggtggtttc
aaattcatggattccgctcatataaaggatgtaatagctcatttaagggctttctccagt
cgggttgacagaataagctggtatagaattcttatgcttcttaataaaatcggtcccgcc
gcggcacgaaaaattttcaaatctgtttcagaaaaaggaatcgatgccggcctgtcgggc
ataaaacttaagggaaaggcagccgagggcattatgaagcttaaggggcttttcgctaaa
atggattcacaatcagtaactgtcgccgacatgggagaagctgtaatagaatattataca
ccgctcttggaaacaatgtatgatgatcatcacaaacgcagaaaacaccttgagcatctt
gttgggattatggaacgatacaggaatatgggagaatttttaacagatatggccctggag
cctccaaatacagtgaaagatgactcctttacgacaaatccttcagataaaggcaggctg
gttctttccacagtgcactcagccaaagggttagagtggaatactgtatttgttatctgg
acccttgacggacgttttccgtcggcctatgctttaaataatgacaaagaccttgaagaa
gaactgaggctaatgtatgttgccgcaacacgcgcaaaggaaaatctcttttttatttac
ccgcaaaatgtctacgacaaaagctcaaacagctttttatgcaacccgagccgctttctc
gagataatacccgacgatattcttaaaaaagaattttaa
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