Desulfosarcina sp. BuS5: BuS5_01989
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Entry
BuS5_01989 CDS
T10385
Name
(GenBank) two-component system, NtrC family, response regulator PilR
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
desb Desulfosarcina sp. BuS5
Pathway
desb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
desb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BuS5_01989
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
desb02022
]
BuS5_01989
02035 Bacterial motility proteins [BR:
desb02035
]
BuS5_01989
Two-component system [BR:
desb02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
BuS5_01989
Bacterial motility proteins [BR:
desb02035
]
Pilus system
Twitching motility proteins
BuS5_01989
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA
AAA_5
Mg_chelatase
AAA_2
AAA_19
AAA_22
VpsR
TIP49
SBP_bac_5
bpMoxR
MCM
cREC_REC
AAA_16
PDE8A_N
AAA_7
Pre_tape_measure
Motif
Other DBs
NCBI-ProteinID:
WDN89021
LinkDB
All DBs
Position
1995415..1996845
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AA seq
476 aa
AA seq
DB search
MLTRNNNIKHTKQQQSGRKPHILVVDDELSMREFLEIMLSRDGYEVTTAGTGREAVALLK
NKKFDLLLCDIRLGDISGLEVLKACKEKNHSTVVIMISAYASTETAVEAMNTGAYDYLPK
PFDNNELRQAIAKALDLKTVEHEKKFLDQELKKNLHFGILVGNSSRMMHIYDMIRQVAAT
RTNIMISGESGTGKELVAKAIHGESNRNEKPFVTINCGGISENLIESELFGHKKGSFTGA
TYDKQGLFELADKGTLFLDEIGELTLQLQVKLLRAVQEKTFRAVGGTSDISSDIRIISAT
NRKLEDEVIEGRFREDLFYRLNVIEIKMPPLRERKSDLRILAQHFLEKFAKEAGKKISKI
SSYAIDLLNKYDFPGNVRELENLMERSVALSSTNILLPDNLALSIHKNRWIEGVQGKRFD
LDEVENGVSLDNIMEEIERAYLKKAMSCAGNSKNKAAGLLGINLRSMRYRCDKLGV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgttaacccgaaacaataatatcaaacataccaaacaacagcaatccggccgcaaacca
cacatcctggtagttgacgacgaactgagtatgcgtgaatttttggaaatcatgcttagc
cgggacgggtatgaggtcactactgccggaacaggccgtgaagccgtcgccctgttgaaa
aacaaaaaattcgatcttctgctttgtgatataaggctgggtgacatttccggccttgag
gttctgaaggcgtgcaaagaaaaaaatcacagcaccgttgtaataatgatttccgcctat
gcctctacagaaacagcggtggaagccatgaatacaggcgcctacgattatttacccaag
ccttttgacaataatgagttaaggcaggccatagcaaaggcccttgacctgaagacagtt
gagcatgaaaaaaaatttctggaccaggaactgaaaaaaaatctgcatttcggaatcctg
gtgggaaacagctccaggatgatgcatatatacgatatgatcagacaggtggccgcaacc
aggaccaatataatgatatccggtgaaagcggaaccgggaaagagcttgtagccaaagcc
atacacggagagagcaaccgcaatgaaaagccttttgtcaccattaattgcggcggcatt
tcggaaaaccttattgagagtgaactcttcgggcataaaaaaggttcctttaccggggcg
acatacgataaacaaggcctttttgagcttgcggacaagggaaccctcttccttgacgaa
ataggcgaactgaccctgcagctccaggttaaacttctccgggcggtgcaggaaaaaacc
ttcagggcggtaggcggaactagtgatatatcatccgatataaggataatttcagccacc
aaccggaaactcgaagacgaggttattgaaggacgttttagagaggatcttttctacagg
ctgaatgttatcgaaatcaagatgccgccactgagagaaagaaagagcgatctgcgtatc
ctggcccagcattttctcgaaaaatttgcaaaagaggcaggtaaaaaaatttcaaaaatc
tcatcctatgccatcgacctgttgaataaatatgatttccctggaaatgtccgtgaactt
gaaaacctgatggagcgcagcgtggcgctctccagcaccaacatactcctgcccgacaac
cttgccctgtcgatacataaaaacagatggatagaaggtgtacaaggaaagcgcttcgac
cttgatgaagtggagaacggggtttccctggataatattatggaagagatagagcgggcc
tacctgaaaaaagccatgagctgcgctggaaacagcaaaaataaagccgccggcctcctc
ggaatcaacctccgatcaatgcgctaccgttgtgacaagctgggggtttag
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