Desulfosarcina sp. BuS5: BuS5_03410
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Entry
BuS5_03410 CDS
T10385
Name
(GenBank) RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase
Organism
desb Desulfosarcina sp. BuS5
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
Pro_dh
DUF1289
Motif
Other DBs
NCBI-ProteinID:
WDN90439
LinkDB
All DBs
Position
complement(3502882..3506502)
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AA seq
1206 aa
AA seq
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MENLENIIAESTELAAKWQQRADQILSSKEKTYQKRFQRLLKHSIDKVVLTKIIDQCFRS
VNTGRVAGRIRSLFQRYGIPHFFLWRERLLIRFFLLFGRFFHRISIPVMIKTIIKECGRF
ILPGEKEALLVILQERRTSSVKMNINHIGEAVLGEDEALRQLNRYIEDLKKPEIEHISVK
ISSLYSQIQPFAFEDSVAVIKDRLSILYRTAQENPFVESNGTGRPKFVNLDMEGSSDLEI
TVTAFMQALDEAGFESCQAGIALQSYLPQGFEIQQRLTKWARQRTANGGGPIKIRIVKGA
NLEMEKIESDISNWSLAPYDKKLDVDANFKRMLEFGMRPENITSVHLGIASHNLFELAFA
YILSSQRLIGEYVVFEMLEGMAPHVMSAIQETIGKILMYAPVASKARFINAVAYLIRRLD
ENTAEENFLRYTCNLKTDSPEWSFLKQQFIDSCHWIHNPEMVSHRCQDRRDETSNEKKGT
FFENEFVNEPDTDWSLPGNHEWAGSIKNKWRKFSGDEPLEIPITVGGIDIFENRQKVESI
DPSSIRADLNEKVCVAVCALAGKEDIDSAAAIARADPDQWRNMSPDERHAILSRVAVNLR
RSRGDLIGAAAANTGKIFSEADVEVSEAIDFAEYYPYSLKALAGLNNIECRGKGVGLVIS
PWNFPIAIPCGGITAALAAGNTVIFKPASAAIVPAWELCRCFWAAGVSKNVLQFLPCLGS
AAGAKLVAHPEIDFIIFTGGTDTALQILRDRPEIYFAGETGGKNATIVTALSDRDQAIKN
VIHSAFSNCGQKCSATSLLILEKEVYADKNFKKQLVDAAQSYATGSAWNFKNRMGPLIQP
PAGKLKKGLTHLSKGEEWALQPENIHGNPNLWTPGIKWGVQPGSYVHFTEFFGPLLGVMR
AKNLDNAVDITNQTGYGLTSGLESLDYEEQEYWKKRIKAGNLYINRGTTGAVVLRQPFGG
MGKSALGAGIKAGGPNYVMQFMEIRDISPPLTGAVADDHPLLQLTRVWRQKLNRGGLKEY
KTDLYKALSAVKSYRYAKEAEFSVEKDYFHLRGQDNLLRYLPLGKMTVRLHGKDSLFEIL
ARIAAVKISGCSLIISIPEGLKNGSVEFLSGKDGKEFIGSPEILYQSDKDLIDMLPEVDG
IRYAAPERVPLPLLKAAAGLGFYVSGTRVVMEGRIELLQYHKEQSICCNYHRYGNLGERG
VNYDKK
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctggaaaatataatagcggaatcaacggaattggcagcaaaatggcagcaa
cgcgctgatcaaattttaagctcgaaagaaaagacttatcaaaaaagatttcagcgtctt
cttaagcattcaatcgataaggttgttctgaccaaaataattgatcagtgttttagatcc
gtaaataccggccgggttgccggccggatcagaagcctgtttcaaagatacggaattccg
catttttttttatggcgtgaacgactcttaataagattttttctattattcggccgattt
tttcacaggatatcgattccggtaatgataaagacgatcataaaggaatgcggaagattt
attctccctggagaaaaagaagcgctgctcgttattctccaggaaagaagaacaagctct
gtaaaaatgaatattaatcatatcggagaagcggttctgggagaggacgaggccctgcgc
caactgaaccggtatattgaggatttgaaaaaaccggagatcgagcatatttccgtaaaa
atctcatctctctattcccaaatccaaccgtttgcatttgaagatagtgttgccgttatt
aaggatcgtttgtccatcctttaccgtacagcccaggagaatccctttgtagaaagcaac
ggcaccggccggcctaaatttgtaaacctggatatggaaggatcttccgacctggaaatt
actgtcacggcttttatgcaggccctggatgaagccgggtttgagagctgccaggccggg
atcgccctgcagtcatatttgccccaaggctttgagattcaacaaaggctgacaaaatgg
gccaggcagaggacggccaatggcggcggccccataaagatccgaattgtcaaaggcgct
aacctggaaatggaaaaaattgaatcggatatcagcaactggtctctggcgccttatgat
aaaaaactcgatgtggatgccaattttaaaagaatgctggaattcggaatgcggcctgaa
aacattacttcggttcatttaggcatcgcatctcacaatctgtttgaattggcttttgca
tacattctttccagccaaaggctgataggcgaatatgttgtctttgaaatgctggaaggg
atggccccgcatgtgatgagcgcaatccaggagaccatcgggaagatcctgatgtatgct
cctgtggcgtctaaagcgagatttataaatgcggtcgcctaccttattcgccgccttgat
gagaatacggcggaagagaattttttgcgttatacctgcaaccttaaaaccgattcgccg
gaatggtcatttttaaagcagcagttcatcgattcatgccactggatacataatccggaa
atggtatcccacaggtgccaggaccgcagagatgagacatccaacgaaaaaaaagggact
ttttttgaaaatgaatttgtaaatgaaccggacacggactggtcattgcccggcaatcac
gagtgggccgggtccataaaaaataaatggagaaaattttcgggtgatgagccccttgaa
attcccatcacagtcgggggcatagatatttttgaaaaccgacaaaaggttgaatccatt
gatccgtccagcatacgggcggatctgaatgaaaaggtttgcgtggctgtctgtgcactg
gccggaaaagaggatatagactcggccgcagcaattgccagggcagatcctgaccagtgg
cggaatatgagtccggatgaacggcatgcgatcctttcccgggtcgccgtcaacctgaga
cgctccaggggtgatctgataggcgctgcagctgcaaatacaggcaagattttcagtgaa
gccgatgtggaggtttccgaagccatagattttgctgaatattatccatattccctgaaa
gccctggcaggtttaaataatatagagtgtagaggaaaaggcgtcggcctggtcatctcc
ccctggaattttccgattgcgattccctgcggaggcataacagccgcccttgccgccggt
aataccgttatatttaaaccggcttctgccgccatagttccggcctgggaattgtgccga
tgcttctgggcggcgggagtgtccaaaaatgtgctccaatttctcccatgcctgggatcg
gccgcaggagcaaaacttgttgcgcatccggaaattgattttataatttttaccggtgga
accgatacggctctgcaaatactgcgagaccggccggaaatatattttgccggtgaaaca
ggcggaaaaaatgccacgattgttacagcgctgtcggacagggatcaggctataaagaat
gtgattcattccgccttcagcaactgcggacagaaatgttccgccacatctctgctgatc
cttgaaaaagaggtttatgctgacaaaaattttaaaaaacagcttgtggatgccgcccaa
agttatgcaaccgggtcggcctggaattttaaaaacagaatggggcctttgattcaacct
cccgcgggtaagctgaaaaaggggcttacccatttaagtaaaggtgaagagtgggcactg
cagcctgaaaacatacatggtaatcctaatttatggactcccggcattaaatggggtgtt
cagccgggtagctacgtccattttactgaatttttcggtcccttgctgggtgttatgcgc
gcgaaaaatctggataatgctgttgatattacgaatcagacaggttatgggttaacctca
gggcttgaaagcctggattatgaagaacaggaatactggaaaaaaagaataaaagcaggc
aatctctatatcaaccgcggcacaaccggagcagttgtgctccggcagcccttcggcggg
atgggcaaatccgccctgggcgccggaatcaaggccggcggcccaaattatgttatgcag
tttatggagatcagagatatcagcccaccattaaccggggcagtcgctgatgatcatccc
ttattgcagttgacaagagtctggcgccaaaagcttaatcggggcgggctaaaagaatat
aagactgatctttataaagcattaagtgctgtaaagagttatcgctatgccaaagaagct
gaattttctgtagaaaaggattactttcacctgagaggacaggataatctgctccgctac
ctccccctgggaaagatgaccgtgcgtttgcatggtaaggacagcctttttgaaatattg
gcccgtattgctgctgtgaagatttcaggatgcagtctcattatcagcatcccggaagga
ttaaagaatggttcggttgaattcctttccggcaaagatggaaaggagttcatcggcagc
cctgaaatcctctatcagagcgataaggatctgatcgacatgctgcccgaggtggatggt
attcgttacgccgcgccggaacgggtaccgcttcctctcctcaaggctgccgcgggcctg
gggttttatgtttccggaacaagagtagttatggaaggccggatcgagcttttacagtat
cataaggaacagagcatttgctgtaattatcatagatacggtaatcttggtgaacgagga
gtaaattatgacaaaaaataa
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