Desulfoscipio sp. L: ABDB91_01895
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Entry
ABDB91_01895 CDS
T11602
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
Organism
desl Desulfoscipio sp. L
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
XBD04780
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Position
396533..400006
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AA seq
1157 aa
AA seq
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MLDLNNFDRIRIGLASPEQIRAWSSGEVKKPETINYRTLKPERDGLFCERIFGPTRDWEC
HCGKYKRVRYKGVICDRCGVEVTRSKVRRERLGHIELAAPVSHIWYFKGIPSRMGLLLDM
SPRALEKVLYFVSYIVIDPMETPLLKKQLLTETEYREHREKYGSNFKAFMGAEAIKQLLQ
EIDLEEMNRELRLELRDVSGQRKIRAVRRLEVVEAFRKSGNRPEWMIMDVVPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVRNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLQLHQCGLPKE
MALELFKPFVMKKLVNDGHAHNIKSAKRMVERVRPEVWDVLEEVIKDHPVMLNRAPTLHR
LGIQAFEPKLVEGKAIQIHPMVCTAYNADFDGDQMAVHLPLSAESQAEARLLMLSAYNIL
NPKDGHPVAIPTQDMVLGSYYLTIEKPGDLGEGKILNGAEEATIAYENGAVSLHAKVKVR
LDGEIIETTVGRVIFNSAVPKELGYFNRVADKKALSRIVDESYRKLGFSATGRLLDGIKG
LGFKFATKAGVTIGNADIIIPEKKKEILADAEKQVGKVEVQYRRGLITEEERYRKVIGIW
NDATRKVTDALIDSLDKFNPVYMMANSGARGNIQQIRQLAGMRGLMADPSGRIIDLPIKA
NFREGLTVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVAQDVIVREVDCGTHEGIY
VSEIKDGTEVIERLEDRIAGRITLEDIVHPETGEVIVRVGRVIEHEDADNIVAAGIKKVK
IRSVLTCKSRYGVCINCYGRNLATGRMVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA
GDDITQGLPRVEELFEARKPKGQAIVTEEGGVVELREVKGRREIDITSDDGSKNNYVIPY
GARLKVQNGDRVDAGDELTEGSVNPHDLLKIKGANGVQIYLLQEVQRVYRLQGVDINDKH
IEVMIRQMLRKVRIEDQGDTSLLPGGLIDMFDFEEENRLVELEGGEPAQGKPVLLGITKA
SLATDSFLSAASFQETTRVLTEAAIKGKMDPLLGLKENVIIGKLVPAGTGMSRYRNVEIK
PSEEMDNPDGPAVEQND
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
ttgttggacttgaacaacttcgaccgaattcgcataggcctggcttctccggaacaaatc
cgagcatggtcaagcggtgaggttaagaagcccgagaccatcaactaccgcactttgaaa
cctgagcgggacggattattctgtgaacgtatttttggtcccacccgcgattgggaatgt
cattgcggtaaatataaacgtgttcgctataagggcgtaatttgcgatcgatgtggtgtt
gaagtaacgcgttccaaggtgcgcagggaaaggctggggcatattgagctggccgctccg
gtctctcatatctggtattttaaggggataccaagccggatggggcttttgctggatatg
tcgcctcgggcgttggaaaaggtgctgtattttgtttcctatatagtaatcgatcccatg
gaaacaccgctgcttaaaaagcagctgcttaccgaaaccgaataccgtgagcacagggaa
aaatacggcagcaattttaaggcgtttatgggagccgaggcaatcaagcagctgctgcaa
gaaattgatttggaagaaatgaatcgggagctgcgtttggaactgcgtgatgtttccggg
cagcgtaaaattcgcgctgttcgccgactggaagtggtagaggcttttcgtaaaagcggc
aaccgcccggagtggatgattatggatgtggtgcctgtaatcccgcccgagctgcgtccc
atggtacagttggacggcggccggtttgccacttcggatttaaacgacctttatcgtcgg
gtgatcaaccgtaataaccgtttgaaaagactgctggatttgggtgctccggatattata
gtgcgtaatgagaagcgcatgctgcaggaagccgtggatgctcttattgataacggtaga
cggggccgtccggtgaccggtccgggaaatcgtccgttgaaatcactgagcgatatgcta
aagggcaaacaaggccggtttcggcaaaacctgttgggaaaaagggtggattattccggg
cgttccgtaattgtagtcggtcccaatttgcagttgcaccagtgcggtttacctaaagaa
atggctttagagctgttcaaaccctttgtgatgaaaaaattagttaatgacggccatgcc
cataatataaaaagtgccaagcgtatggtggaacgtgtgcgcccggaagtgtgggacgtt
ctggaagaagttattaaggatcacccggtgatgttaaaccgcgcgcctacactgcaccgt
ctgggcattcaggcttttgaaccgaagctggtggaagggaaggccattcaaattcacccc
atggtctgtaccgcttataacgccgactttgacggggaccagatggcggtgcacctgcct
ttatcggcggagtcccaggccgaggcaagattgttgatgctttccgcatataatatttta
aaccccaaggatggccatcctgtggctattcccacccaggatatggtgctgggcagctat
tacctgactatagagaagcccggtgatcttggcgagggcaagatattaaacggtgcggaa
gaggcaacgatagcctatgaaaacggcgcggtaagtctccatgccaaggttaaggtcagg
ttggacggagagattatagaaacaactgtgggaagggttatttttaattcggctgttcca
aaagaactgggctattttaacagggtggccgacaaaaaggcgctcagccggattgtggat
gaatcttaccgtaagcttggtttttccgctacgggccggctattggatggaattaagggc
ttgggctttaaatttgccaccaaggcaggggtaactatcggcaatgcggatataattatt
cccgaaaagaagaaagaaatactggccgacgcagaaaaacaagtgggaaaagtagaggtc
cagtaccgccggggcctgatcacagaggaagagcgctatcgtaaagtaatcggcatttgg
aatgatgctaccagaaaggttaccgatgcgctgatcgattccctggataaatttaacccg
gtttatatgatggccaactccggtgcccgcggtaatattcagcaaattcgccagctggcg
ggtatgcggggcttgatggccgacccgtcggggcggattattgatctgcctattaaagct
aacttccgtgagggcctgacggttttggaatactttatttccacgcacggcgcccgtaag
ggattggccgataccgctctgcgtacggcggactcgggatatttaacccgccgtcttgtg
gatgtggcccaggatgtaatcgtacgggaagttgactgcggcactcacgagggtatctat
gtttccgaaatcaaagacggcaccgaggtaattgaaaggctggaggatcgcattgccggg
cggataaccctggaggatatagtacatcccgaaacaggcgaggtcatagtacgggttggg
cgggtgattgagcacgaggatgctgacaacattgtggccgccggcattaagaaggtaaaa
atccgctcggtactcacttgcaaaagcaggtacggggtgtgcatcaattgttacggtcgc
aatttggctaccgggcgcatggtggatatcggcgaggcggtgggtattattgctgcgcaa
tccatcggtgaacccggcacacagttgactatgcgcacattccacaccggtggcgtggcc
ggagatgatataactcaaggtctgcccagggtagaggagctttttgaggcccgcaaacca
aaaggccaggctatcgtcactgaagagggcggtgtggtggaattaagagaagttaagggc
cgccgggaaatagatattaccagtgacgacggaagtaaaaacaactatgtcattccttat
ggcgctcgtttgaaagtgcaaaatggagatcgggtggatgccggtgacgaattgaccgag
ggttcggtaaacccgcatgacttgctgaaaatcaagggtgccaatggagtgcaaatttat
ctgttgcaggaagtgcagcgggtataccgtttgcaaggcgtggatattaacgacaagcac
attgaagtcatgatccgccagatgctgcgcaaggtgagaattgaggaccagggagatacg
tcgctgctgcccggaggattaatagatatgtttgattttgaagaggaaaacagattggtt
gagcttgaaggcggtgaaccggctcagggtaagcctgtgcttctgggtattaccaaggca
tccctggcaacggattcattcctttcggcggcctctttccaggagacaaccagggtgctt
accgaagcggctattaaagggaaaatggacccgctgttgggcctcaaggaaaatgtcatt
attggcaagctggtgccggccggtaccgggatgagccgctacaggaacgttgagataaag
ccgtccgaggagatggacaatcccgatggaccggctgtggaacaaaatgactga
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