Desulfoscipio sp. L: ABDB91_09415
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Entry
ABDB91_09415 CDS
T11602
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
Organism
desl Desulfoscipio sp. L
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
HHH
HHH_8
BRCT_2
RNA_pol_A_CTD
DUF7340
Motif
Other DBs
NCBI-ProteinID:
XBD06158
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Position
complement(1985072..1987096)
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AA seq
674 aa
AA seq
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MGGGHEKIRQTIDRLRREIEQHNYYYYVLDAPTITDAQYDRLMADLQQLEKENPLLITPD
SPTQRVGGKPREGFTTVQHPVAMLSLANAFSDAELAEFDRRVRGSLGGEPYQYVVELKID
GLAVSLTYQDSIFVRGATRGDGSTGEDITANLKTIRSIPLRLHQPVDLLEVRGEVYMPKE
SFVELNRRREEMGEPLFANPRNAAAGSLRQLDPAVTAGRNLSIFVYGIGAAELSGHQLPT
SHSEGLKWLEGLGLRVNSHCQLCRDIGEAISYCRIWQNKKADLPYQIDGLVIKVNSLAQQ
SALGFTMKSPRWAMAFKFPPEQAQTTVRDIIVSVGRTGVITPTAVLDPVFLAGSTVSRAT
LHNEDIIREKDIRIGDRVVIHKAGDVIPEVVEVLKDSRTGGEKVFSMPAACPACGAEVVR
ATGEAARRCTGAACPAQLLEGMIHFASRGAMDIAGLGPAVVAQLTEAGLVRDVSDLYSLT
EEQLLRLERFGDKSAENLVRAIAASKENPLHRLIFALGIRHAGERAARVLAEHFGDLDRL
MNAGYDELITIPEIGPKIAESIINFAREPQNRALIERLAEYGVNMTAEAAPASLSDGPLK
GKTLVLTGTLAVLKRDEAKELVEQAGGKVSSSVSKKTDYVVAGENPGSKYEKAVKLNLPV
LDEQEFLALIKPVL
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcggtcatgaaaagattcgccagacgattgataggctgcgccgggaaatagaa
cagcataattactattattacgtgctggatgcgcccaccattacagatgcgcaatacgac
cggctaatggccgatttgcagcaattggaaaaggaaaaccctttactgatcaccccggac
tcgcctactcagcgggtgggcggtaaaccgcgggagggctttaccacggtacagcacccg
gtggccatgctcagcctggctaacgctttcagtgacgcggagcttgcggagtttgaccgc
cgggtgcgcggttccctgggtggtgagccttatcaatacgtggtggagctgaaaattgac
ggtttggcggtgtcgctgacctatcaggacagtattttcgtgcgcggggctacccggggg
gacggcagtaccggggaagatattaccgccaatctaaaaaccatccgcagtataccgctg
cgcctgcatcagccggtggacttgctggaagtgcgcggcgaggtatatatgcccaaggag
tcttttgttgaattaaatcggcggcgtgaggaaatgggcgagccactctttgccaatccg
cgcaatgcggcagccggctcactgcgccagctggacccggcagtgacggccgggcgaaat
ctaagtatttttgtttacggtatcggcgccgccgagcttagcggccatcaactgccgaca
tcgcacagcgaggggctgaagtggctggagggcctgggactgcgtgtaaacagccactgc
cagctttgccgggatatcggcgaggcaatcagctactgccggatttggcaaaataaaaag
gcggatttgccttaccaaatagacggcctggtgattaaagtaaattcactggcccagcag
tccgccttggggttcaccatgaaaagtccccgctgggcaatggcttttaaattccccccc
gagcaggctcaaactacagtgcgggatatcattgtcagcgtggggcgcacaggggtaatt
acaccgaccgccgtactggacccggtttttctggccggttccaccgtcagcagggccact
ttacataacgaggacattattcgagaaaaagatatccgtatcggtgaccgggtggttatc
cataaagcgggcgatgtgatacctgaagtggtggaggtattaaaagatagccgaacgggc
ggggaaaaggttttcagtatgcccgccgcgtgtccggcctgcggcgccgaggtggtgcga
gccaccggcgaggccgcccgccgctgcaccggcgcggcttgcccggctcaattattggag
ggaatgatccattttgcttcccggggggcaatggatattgccggactgggtccggccgtg
gttgcccaattaacagaggccgggctggtcagggatgtgtccgatttatacagcctgacc
gaggaacagctgctgcggttggaacgcttcggggataaatcggccgaaaacctggtacgg
gctattgcggccagtaaagaaaacccgctgcaccgcttgatatttgcgctgggtatccgg
cacgcgggtgagcgggcggcgcgtgtgctggccgaacattttggtgatctcgacaggcta
atgaatgccggttacgacgaactgatcacaataccggaaataggtcccaaaattgccgaa
agcataattaactttgcacgggagccgcaaaaccgggctttaattgaacgcttggcggag
tatggtgtcaacatgacagccgaagccgcgcccgccagcctgtcagatggaccgctgaag
gggaaaactctggtgctgacaggcaccctggcggtcttgaaaagggacgaggcaaaagaa
ttggtagaacaggccgggggtaaagtgtcttcatcggtaagtaaaaaaaccgattatgta
gtggcgggtgaaaacccgggcagtaagtatgaaaaagcggtcaagctgaatctgccggtg
cttgatgagcaggaatttctggctctgataaaacctgtcctttag
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