KEGG   Desulfomicrobium sp. ZS1: NLA06_00435
Entry
NLA06_00435       CDS       T08898                                 
Name
(GenBank) HD domain-containing protein
  KO
K03698  3'-5' exoribonuclease [EC:3.1.-.-]
Organism
desu  Desulfomicrobium sp. ZS1
Brite
KEGG Orthology (KO) [BR:desu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:desu03019]
    NLA06_00435
Messenger RNA biogenesis [BR:desu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     NLA06_00435
SSDB
Motif
Pfam: HD tRNA_anti-codon Cas3_HD TraI_2 HDOD
Other DBs
NCBI-ProteinID: UTF50383
LinkDB
Position
complement(95096..96181)
AA seq 361 aa
MKHKKTYVRDLAEGNSISEVFALSKAQRKEAKNGPYWQLTLTDRTGNIEARIWFPQSQQF
ETLQPEQFVAVNGQVASFKDQLQMNISDMAVIDPREVGLDLTDFVPSSTIPPEELLQEME
EFLHAELTFKPWKALCKSVLHDEHIRASILSAPGAKSIHHAYAGGLLEHTLAIMRICKAL
SQLYPQVDKEILLVAALFHDLGKAFELSHGISREYTDAGRLLGHIQLGLETLEPFLRKTK
DLPEALAMHLKHLIVAHHGELAFGSPCLPQTVEAFILHYADNLDAKVNTVHGALTAPDGE
EISGWSEYHRTLGRYLYQPMRTPVSAKAPEPEPKTPKKTAPRSEESPLLKAMGITATSGN
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaagcacaaaaaaacctacgtacgcgatttggctgaaggaaattcgatttccgaggta
tttgccctttccaaggcccagcggaaagaagccaagaacggcccctattggcaactgacc
ctgacggaccgcaccggcaacatcgaggcccggatctggttcccccagagccaacaattc
gaaaccctccagcccgagcaattcgtggccgtaaacggacaggtggcctccttcaaggac
cagctgcagatgaacataagcgacatggccgtcatcgacccgcgcgaagtgggcctggac
ctgaccgacttcgtgccgtcctccaccattcccccggaggaactcctgcaggaaatggaa
gaattcctgcacgccgagctgaccttcaagccatggaaggccctgtgcaagagcgtgctg
cacgacgaacacatccgcgcgtccattttgagcgcgcccggagccaaatccattcatcac
gcctacgccggagggctgctggagcacaccctggccatcatgcgcatctgcaaggccttg
tcccagctttatccgcaggtggataaggaaattctgctcgtggccgccctgttccacgat
ctgggcaaggcgtttgaactttcccacggcatcagccgcgaatacaccgatgccggccgc
ctgctggggcacatccagctcggtctggagactctggagccttttctgcgcaagaccaaa
gacctgcctgaagcactggccatgcacctcaagcacctcatcgtcgcccatcacggcgag
ttggcctttggttcgccctgcctgccgcagaccgtggaggctttcatcctgcactacgcg
gataatctggacgccaaggtcaataccgtgcatggagccctgaccgcgcccgatggtgag
gagatcagcggctggagcgaatatcaccgcactcttggccgatatctgtaccaacccatg
cgcacgccggtctcggccaaggcgccggagcccgaacccaaaacgccgaagaagacggcg
cccaggtccgaggaatcgccgcttttgaaggccatgggcatcaccgcaacatccggcaac
tcgtaa

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