Desulfomicrobium sp. ZS1: NLA06_00615
Help
Entry
NLA06_00615 CDS
T08898
Name
(GenBank) Smr/MutS family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
desu
Desulfomicrobium sp. ZS1
Pathway
desu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
desu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NLA06_00615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
desu03400
]
NLA06_00615
DNA repair and recombination proteins [BR:
desu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NLA06_00615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smr
MutS_V
MSSS
DUF1676
Pox_A32
CCCAP
DUF2576
DUF3584
Motif
Other DBs
NCBI-ProteinID:
UTF50418
LinkDB
All DBs
Position
133230..135527
Genome browser
AA seq
765 aa
AA seq
DB search
MDSRTLQLLEYPKVLQHLSHFAVSEAGRDACLSLLPETDPVRIAERSALVREAIHFCAFK
DVRLAAFPDVAGVFAYLQSPLAFLDVDGLIGLFEMLKVAAALLERLGPADSERYPGLAAL
VAGLTLPPKTWSGLSRCLAPDGTIRDEASPELYSVRQEIRRVHQMCTRKVQDFFQNKDLQ
FILQDEFLTISSDRYVLALKNNFKGRLKGIVHDYSQTGETCYFEPLFLVELNNDLQEYKQ
EERAEEQKVLRFLSELVRAEQRAIELTFDELVRFDGLLAICHFARHSDAHVVDIAPGAPL
SLIQARHPLLVFGQDHVVPVDLELKAGQRALIITGGNAGGKTVCLKTLGLLGLMAHAGLP
VTAAEGSTLPFWNNFVVSMGDEQSIEQSLSTFTAQIRHFSEVWPRIDTYTLVILDEFGVG
TDPSQGAALAQAVVDGLLERQAWVGAVTHFPALKAYGLSKDGVRAASVIFSPDTRKPLFK
LGYDQVGASRALDVAREQGLPESILARAQDYLYLDAGDAEEIFERLNRLAAAKEEELDKA
RARTRDLELKFSRKLEKLDQERSRMQKELREAAQEIMRQWREGRRGRKEALKEIAQLRDS
VAPSPETDEAIEKLSIQAIAQGQVLLYLPWNKTGLVQEIDGKKERVRLDMGGVSLWVGLS
DVQVSAKEKHDGGKVVLKSAPAPVTPLRLDLRGMRADEAESELSRFLDKALLAGRTEVEI
IHGMGTGAMRRMVHEHLKRSRAVGDFRLGNADEGGDGVTKVALAD
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggattcaagaacattgcagctgctggaatatccaaaggtcctgcagcatctttcgcac
ttcgcggtcagtgaggcgggcagggatgcctgcctttcgcttttgcctgaaaccgatccc
gtgcgcattgccgaacgctcggccctggtccgggaggccatccatttttgcgccttcaag
gatgtgcgactggcggcctttcccgatgtggccggggtgtttgcctatctgcagagtccc
ctggcatttcttgacgtggatgggctcattgggctctttgagatgctcaaagtggctgcg
gctcttctggagcgtctcggacctgccgactcggagcgctatcccggcctggccgcgttg
gtggcggggctgacgcttccgcccaaaacctggtccggcctgtcgcgttgcctggccccc
gacggaacgattcgggacgaagcctcgcccgaactttattccgtgcgtcaggagatccgc
cgcgtgcatcagatgtgcacccgcaaggttcaggatttcttccagaacaaggatctgcag
ttcattttgcaggatgaatttctgaccatctcctccgaccgctacgtcctggctcttaag
aacaatttcaagggacgcctcaagggcatagtgcacgactattcccagaccggggagacc
tgttatttcgagcctctttttttggtcgagctcaacaacgatctgcaggaatacaagcag
gaggagcgcgccgaagagcagaaggtcctgcgttttctgagcgagctggtccgcgcggag
cagcgcgccatcgaactcacctttgatgaactggtgcgtttcgacgggcttttggccatt
tgccattttgcccgccacagcgacgcccatgtcgttgatatagcgccaggcgcgccgctc
tctctgattcaggcgcggcatccgcttctggtcttcgggcaggatcatgtcgtgcccgtt
gatcttgagcttaaggcggggcagcgtgcgctgatcatcaccggcggcaacgcgggcggc
aagaccgtgtgcctgaagaccctggggctgcttggcctcatggctcacgcagggttgccc
gtcaccgcggccgagggcagcacgttgccgttttggaataattttgtcgtctccatgggc
gatgagcagtccattgagcagagcctgtccacgttcacggctcagatccggcatttcagc
gaggtttggcccagaatcgacacgtacaccctggtcatcctcgatgaattcggcgtgggc
accgatcccagccagggcgcggccctggcccaggccgtggtcgacggactgcttgaacgt
caggcctgggtcggcgcggtaacgcattttccggcgctcaaggcgtatgggctttccaag
gacggggttcgcgccgcttcggtcattttttccccggacaccaggaagccgctcttcaag
ctcggctacgatcaggttggcgccagccgggcccttgatgtggcccgggagcagggactc
ccggagtccattttggcgcgggcccaggattacctgtacctcgatgcgggcgatgccgag
gagattttcgagcgtctcaatcgtctggcagcggccaaggaagaggaattggacaaggct
cgtgcccgcacccgcgaccttgaactcaagttttcccgcaagctcgaaaagctcgatcaa
gagagaagccgcatgcaaaaggaattgcgcgaggccgctcaagagatcatgcgtcagtgg
cgcgaagggcggcgcgggcgcaaggaagccttgaaagagatcgctcagttgcgcgacagc
gtggctccatcgcccgaaacggacgaggcgatcgagaaactttccatccaggccattgcc
caagggcaggtcctgctttatctgccctggaacaaaacaggtctggtgcaggaaatagac
ggcaagaaagagcgcgtgcgcctcgatatgggcggggtttcgctctgggtagggctttct
gatgtgcaggtcagcgcaaaggaaaagcatgatggcggcaaggttgtgctcaagagcgct
cctgctccggtgactcccctgcggctcgatctgcggggcatgagggccgatgaggccgag
tcggagctgtcccgttttctggacaaggcgctgctcgccggacggaccgaggtcgagatc
atacatgggatgggcacgggagccatgcgccggatggtgcatgagcacttgaaaagatcc
agggccgttggcgattttcgtctgggaaatgcggatgaaggcggtgacggcgtgaccaag
gtggccctggcggattaa
DBGET
integrated database retrieval system
