Desulfomicrobium sp. ZS1: NLA06_00825
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Entry
NLA06_00825 CDS
T08898
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
desu
Desulfomicrobium sp. ZS1
Brite
KEGG Orthology (KO) [BR:
desu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
desu03016
]
NLA06_00825 (truB)
Enzymes [BR:
desu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NLA06_00825 (truB)
Transfer RNA biogenesis [BR:
desu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NLA06_00825 (truB)
Prokaryotic type
NLA06_00825 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UTF50456
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All DBs
Position
complement(192074..192997)
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AA seq
307 aa
AA seq
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MSVPALKQLDGVLVLHKPGGPTSADCLNQIKRRLGQKKIGHAGTLDPMATGVLVVLLGQG
TKLAGYLSDDRKTYRGRLILGQATDSYDVQGKVLSEAPWQHVDPEAVRSEVLGWKGTMSQ
EVPPVSAAKHQGKPLYALHRAGKEVPVKVKDVTIFDSQLLSMELPSVHFRVTCSAGTYIR
SLAHSLGMRLGCGAVLSELEREASHPFTLAQAHSLEAVLESGDRLHELVLPMTQALPHWP
KLVLDREQAALVQNGAWLPTSLFPDYPAQEGDRALMLSADQAPLALMEAGMRTGVLSWVI
LRGLWQA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttccggccctgaaacaacttgacggggtgctggttttgcataaaccgggaggc
ccgacctctgcggattgcctgaatcagatcaaacgccgcctgggacagaaaaaaatcggc
cacgccggcaccctcgaccctatggccacgggtgtactggtggttctgctcggacaggga
accaagctggccggatatttaagcgatgaccgcaaaacctaccggggaagacttatcctg
ggacaggccacggacagctacgatgtgcagggcaaggtgctctccgaggcaccctggcaa
cacgtggacccggaagcagtgcggagcgaagtcctcggctggaaggggaccatgagccag
gaagtgccccccgtatcggcggccaagcaccagggcaagcccctgtatgccttgcaccgg
gccggtaaagaggtcccggtcaaagtcaaggatgtgacaattttcgactcgcagcttcta
tccatggagctgccgagtgttcattttcgagtcacctgttccgcaggaacctacatccgc
tccctggcccacagcctggggatgcgacttgggtgcggagcggtgctcagcgaactggag
cgggaggcaagccacccgttcaccctcgcccaggctcatagtctggaagcggtgctggaa
agcggggatcggctccatgagctggtcctgcccatgacccaggctctgccccactggccc
aaactcgtgctcgaccgtgagcaggccgcgttggtgcagaacggggcatggctgccaacc
agcctcttccccgattatccggcccaggaaggggaccgggcgctcatgctctctgccgat
caggcccccctggccctgatggaagcgggcatgcgcacgggcgtcctgtcctgggtcatc
ctgcgcgggctttggcaagcctga
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