Desulfomicrobium sp. ZS1: NLA06_05005
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Entry
NLA06_05005 CDS
T08898
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
desu
Desulfomicrobium sp. ZS1
Pathway
desu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
desu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NLA06_05005 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
desu03400
]
NLA06_05005 (xseB)
Enzymes [BR:
desu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NLA06_05005 (xseB)
DNA repair and recombination proteins [BR:
desu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NLA06_05005 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
UTF51252
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All DBs
Position
1109646..1109876
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AA seq
76 aa
AA seq
DB search
MAKAQQTFEKRLERVREITALLESGDLPLEQGVKLFQEGVRLSKECAAELEQARIIVESA
GQESAAQSGIASGDEA
NT seq
231 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcacaacagactttcgagaaacggctggaacgggtccgtgagattacggcc
ctgcttgaaagcggggatctgcctctggaacagggggtgaagctctttcaggaaggggtg
cgcctctccaaggaatgcgcggcggaactggaacaggcccgcatcatcgtcgagagcgcc
ggtcaggaatcagcggcgcagtccgggattgcgtccggagacgaagcatga
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