KEGG   Desulfomicrobium sp. ZS1: NLA06_06910
Entry
NLA06_06910       CDS       T08898                                 
Name
(GenBank) sigma 54-interacting transcriptional regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
desu  Desulfomicrobium sp. ZS1
Pathway
desu02020  Two-component system
Brite
KEGG Orthology (KO) [BR:desu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NLA06_06910
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:desu02022]
    NLA06_06910
Two-component system [BR:desu02022]
 NtrC family
  HydH-HydG (metal tolerance)
   NLA06_06910
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 PAS_9 HTH_8 PAS PAS_8 PAS_4 PAS_3 AAA_5 AAA AAA_16 AAA_22 HTH_23 HTH_Tnp_ISL3 PAS_7 HTH_28 AAA_2 HTH_50 Diguanyl_cycl_sensor HTH_29 PAS_13 UBA_At5g58720 AAA_7 Sigma70_r4_2 HTH_17 Ribosomal_L14 HTH_24 PSI HTH_1 DUF6671
Other DBs
NCBI-ProteinID: UTF51611
LinkDB
Position
complement(1531765..1533129)
AA seq 454 aa
MEENLNQYWKTVVNTIQDGIMIVTPDGKIVSVNEGFVQMTGYSREELIGTSCSILGCSAC
ELARGIPQCHWCVMFKQGALRKQKCALVRKDGTRVPVVKNASVLKDKDGETIGAVETITD
ISDLVDKEEQLEIFRREISREDSFHGIVGRAATMQQVFDLIDGVAQIDSPVIIYGESGTG
KELTAKAIHEAGPRRDKPFIKVNCAALNESLLESELFGHVKGAYTGAHKDRMGRFESAGD
GDIFLDEIGDLPASTQVKLLRVLEEKVIERVGDHRPIPVQARIITATNRDLTDLVARNLF
RQDLYYRINVIPIRMPALRERREDIPLLASTFFLRTQLKSGKKVHGISPAAMELLVRHSW
PGNVRELRSAFEYAFVACKTDMIEPRDLPAELMNGAVVCTPADVAARSLDEIKKERLAQA
LREANGNQSEAARILGISRTSVWSQMRRYGMGKG
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggaagaaaatctgaatcaatattggaagaccgtggtcaacaccattcaggacgggatc
atgattgtcacgcccgatggtaagatcgtgtccgtcaacgaagggttcgtgcagatgacc
ggctactcccgcgaggagcttatcggcacttcatgctcgattcttgggtgttcggcatgc
gagctggcgcgggggataccgcagtgtcactggtgcgtcatgttcaagcaaggggcgctg
cgcaagcagaaatgcgccctggtgcgcaaggacggaacgcgcgtgcccgtggtcaagaac
gcctccgtgctgaaagacaaggacggcgaaaccatcggcgcggtggagaccatcaccgac
atctccgatctggtggacaaggaggagcagctggaaatcttccggcgcgagatatcgcgg
gaagattcatttcacgggattgtgggccgcgcggccaccatgcagcaggttttcgatctc
atcgacggcgtggcgcagattgattctccggtcatcatctacggcgaaagcggaacaggc
aaggaactcacggccaaggccatccacgaggccgggccgcgccgggacaagcctttcatc
aaggtcaactgcgcggcgctgaatgaatcgctgctggaaagtgaactcttcgggcatgtc
aaaggcgcctataccggagcgcacaaggatcgcatgggccgcttcgagagcgcaggcgac
ggggacatctttctggacgaaatcggggatctgcccgccagcacccaggtcaagctcctg
cgcgtgctggaggaaaaggtcatcgagcgcgtgggcgaccaccgccccatcccggtccag
gccaggatcatcaccgccaccaaccgcgacctgacggatttggtcgccagaaatctcttt
cgccaggatctctactaccgcatcaacgtcatccccatccgcatgccagcactccgcgaa
cgccgcgaggacatcccgcttctggcctccaccttttttctgcgcacacagctcaaatcc
ggcaagaaagtgcacggcatctcgcccgcggccatggagctgctcgtgcgccactcctgg
cccggcaacgtgcgcgagctgcgcagcgccttcgagtacgccttcgtggcctgcaagacg
gacatgatcgaaccccgcgacctgccggccgaactcatgaacggagcggtcgtgtgcacc
cctgccgatgtcgcggccagaagcctggacgagatcaaaaaagagcgcctcgcccaagcc
ctgcgcgaggcaaacggaaaccagtccgaagcggcccgaatcctcggtatttcccggacc
agcgtgtggagccagatgcggcgctacgggatgggcaaagggtga

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