Desulfomicrobium sp. ZS1: NLA06_09325
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Entry
NLA06_09325 CDS
T08898
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
desu
Desulfomicrobium sp. ZS1
Brite
KEGG Orthology (KO) [BR:
desu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
desu03021
]
NLA06_09325
Transcription machinery [BR:
desu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NLA06_09325
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_11
GntR
HTH_24
HTH_28
HTH_6
Motif
Other DBs
NCBI-ProteinID:
UTF48788
LinkDB
All DBs
Position
2133640..2134710
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AA seq
356 aa
AA seq
DB search
MPKNHLQLRTIMNPNQRPEDNALDEELETPLSEDTEEFDEDVVDDSDTVDTVDIDEIAPL
VLATVPRREVATLDPLHIYLQEIKKFKPLELDEEFDLARRYRDEKEEQAAFILITSNLRL
VVKIAMDFQRRWMKNVLDLIQEGNVGLMKAVQKFDPDKGIKFSYYASFWIKAYILKFIMD
NWRMVKIGTTQAQRKLFYNLGKERQRLQAQGFDPNTATLSKNLQVSEADIVEMGQRLGQH
DVSLDMKIGDDSSFTPMDFIPALEAGIEEQMAADEISVLIHDNIDAIRDGLNEKERDILE
QRLLADSPITLREIGDKYGITRERVRQIEARLLQKIKAQMSSTIQDFSSEWIEHEE
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaaccacctccagttacgcaccatcatgaatcccaatcaacgacccgaagac
aatgctctggatgaagagctcgaaacacccctatcagaggacaccgaagaattcgacgag
gatgtcgtcgacgattccgacacggtcgatactgtcgatatcgatgaaatcgccccgctg
gttctggccaccgtccctcgacgcgaagtcgcgaccctggacccgctgcatatctatctt
caggaaatcaagaaattcaaaccactggagctggacgaagaattcgatctggccagacgc
taccgggacgaaaaggaagagcaggcggcctttatccttatcacttccaacctgcgactg
gtggtcaagatcgccatggatttccagcggcgctggatgaaaaacgtgcttgatctgatt
caggaaggcaacgtgggcctcatgaaggcggtccagaaattcgacccggacaagggcatc
aagttttcctattacgcctcgttctggatcaaggcctacatcctgaaattcatcatggac
aactggcgcatggtcaagatcggaaccacccaggcccagcgcaagctgttctacaacctg
ggcaaagagcgccagcgcctgcaggcccagggctttgatccgaacaccgccaccctgtcc
aaaaacctgcaggtctccgaggcggatatcgtggagatggggcagcgcctagggcaacac
gatgtgtccctggacatgaagatcggggacgactccagcttcacgcccatggatttcatt
ccggctcttgaggccggaatcgaggaacagatggccgccgacgagatcagcgtgctcatc
catgacaatattgatgccatacgggacggcctgaacgaaaaggaacgcgacatcctggag
cagcgccttttggccgactcacctatcaccctgcgcgaaatcggggacaagtacgggatc
acacgggaacgggtacgccagatcgaagcccgtctgctgcaaaagatcaaagcccagatg
tcgagcaccatccaagatttctcctcagaatggattgaacatgaagaatga
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