Desulfomicrobium sp. ZS1: NLA06_11975
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Entry
NLA06_11975 CDS
T08898
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
desu
Desulfomicrobium sp. ZS1
Pathway
desu03030
DNA replication
desu03430
Mismatch repair
desu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
desu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NLA06_11975 (dnaX)
03430 Mismatch repair
NLA06_11975 (dnaX)
03440 Homologous recombination
NLA06_11975 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
desu03032
]
NLA06_11975 (dnaX)
03400 DNA repair and recombination proteins [BR:
desu03400
]
NLA06_11975 (dnaX)
Enzymes [BR:
desu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NLA06_11975 (dnaX)
DNA replication proteins [BR:
desu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NLA06_11975 (dnaX)
DNA repair and recombination proteins [BR:
desu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NLA06_11975 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
AAA_30
AAA_5
AAA_16
AAA_14
AAA_19
PIF1
TsaE
ResIII
AAA_18
AAA_2
TIP49
Mg_chelatase
TniB
DEAD
AAA_24
Motif
Other DBs
NCBI-ProteinID:
UTF49278
LinkDB
All DBs
Position
complement(2715250..2717130)
Genome browser
AA seq
626 aa
AA seq
DB search
MSQESLTARYRPQSFAEVAGQDAVKRILSRAASTGRVAPAYLFSGTRGVGKTTLARIFAK
ALNCQNGPASEPCNQCSICRQITLGSAVDVVEIDGASNTGVDNVRRLKEDVGYAPLECRY
KVIIIDEAHMLSKQAFNALLKTLEEPPGHVTFIMATTEPEKFPQTIISRCQHFVFKRLPQ
AELVRHLDGVLKRESFPAEPSAVTLVARRGAGSVRDGMSLLGQVMALGSDSLTLADVREV
LGLAGGEVFVRLIECVQSRDLQGLHALLTQILDQGVDLGFFLRELAGCWRNLFLLHQMGD
AARSIIDLPAEEVDIWAAVAPGFSLGHLHAAWQMTMDSQRKVLTSMEPALALELLLLNLA
CLPDLLAMGAGDARPGGDPGRGAAPGRPAPPRLQAPSVSPRSVSAPARPASQPPASTVTL
REGQADFKSRADGPGAVPPSSATQAAPVAQSASVAQAASVAQPASVAQAASVAQPASVAQ
AASVAQPASVAQAAPVAQAAPAGPRNWAGFVAFCAKRGEGAKPLPGLDKAQGELQGAELV
LTSQHIFLCDRLKASMPLLTEAARSYFGPGVVVRVDTPAESVRKTRTELRELALADPVVR
EAQEKFQARIVEVRPPANGNSKESEI
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggaaagccttaccgcccgttaccgccctcagagttttgcagaagtggccggc
caggacgctgtcaagcgcatcctttcccgggctgcgtccaccggacgggtcgcgccggcc
tatctgttcagcgggacgcgcggggtgggcaagaccactctggcgcggatcttcgccaag
gccctgaactgtcagaatggccccgcctccgagccctgcaaccagtgttcgatctgccgt
cagatcacactcggttcggctgtggacgtggtcgagatcgacggcgcctccaacaccgga
gtggacaatgtccgccgcctgaaagaggacgtgggctacgcgccccttgaatgccgctac
aaggtcatcatcatcgacgaagcgcacatgctctccaagcaggccttcaacgcgctcctg
aaaaccctcgaagaaccgcccggccacgtgaccttcatcatggccaccacggagccggaa
aaatttcctcagaccatcatcagtcgctgccagcatttcgtcttcaagcgtctgccgcag
gccgaactggtgcggcatctcgatggtgtgctcaaacgtgaatcctttccggccgagcct
tccgccgtgactcttgtcgcccggcgcggggccggatcggtgcgcgacggcatgtcgctt
ttgggtcaggtcatggccctgggttccgattccctgaccctggccgacgtgcgcgaggtg
ctgggcctggccgggggagaggtcttcgtgcgcctgatcgaatgcgtgcagtcccgcgac
ctgcaaggcctgcacgccctgctgacccagatcctggaccagggcgtggacctgggtttc
ttcctgcgcgagctggccggatgctggcgcaatctttttctgctgcaccaaatgggtgac
gccgcgcgaagcatcatcgatctgccggccgaagaggtggacatctgggccgctgtcgcg
cccggcttttcccttgggcatttgcacgcggcctggcagatgaccatggacagccagcgc
aaggtgctgaccagcatggagccggccctggccctggaactcctgctcctcaatctggct
tgcctgccggatcttttggccatgggtgccggtgacgcccgccccggcggcgatcccggc
cgcggagctgctccggggcgccccgccccgccccgccttcaggccccgtccgtttcgccc
cggtccgtttccgcgccggcgcgccctgcctcgcagcctccggcgtcgacggttacgctg
cgggaagggcaggctgatttcaaaagccgggccgatggtcccggcgctgttccgcccagc
tccgccacgcaggccgcgcccgtcgcccagtccgcgtctgtcgcccaggccgcgtctgtc
gcccagcccgcgtctgtcgcccaggccgcgtctgtcgcccagcccgcgtctgtcgcccag
gccgcgtctgtcgcccagcccgcgtctgtcgcccaggccgcgcctgtcgcacaggccgcg
cctgccggtcccaggaactgggccggatttgtggctttttgcgccaagcggggggaaggg
gcaaagcctctgcccggtctggacaaggcgcagggggagctccagggcgcggagctcgtg
ttgaccagccagcatatttttttgtgcgaccgcttaaaagccagcatgcctttgctgacg
gaagcggcgcgttcctatttcggcccgggggtggtcgtgcgggttgataccccggcggag
tcggtgcgcaagacccgcaccgaattgcgcgagctggcgctggccgatcccgtggtgcgt
gaggctcaggaaaaatttcaggcccggattgtcgaggtccggcccccagcaaacggaaat
tccaaggagagcgagatatga
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