Desulfomicrobium sp. ZS1: NLA06_12250
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Entry
NLA06_12250 CDS
T08898
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
desu
Desulfomicrobium sp. ZS1
Pathway
desu03030
DNA replication
desu03430
Mismatch repair
desu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
desu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NLA06_12250
03430 Mismatch repair
NLA06_12250
03440 Homologous recombination
NLA06_12250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
desu03032
]
NLA06_12250
03400 DNA repair and recombination proteins [BR:
desu03400
]
NLA06_12250
Enzymes [BR:
desu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NLA06_12250
DNA replication proteins [BR:
desu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NLA06_12250
DNA repair and recombination proteins [BR:
desu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NLA06_12250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UTF49327
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All DBs
Position
complement(2772867..2773400)
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AA seq
177 aa
AA seq
DB search
MSCSLVYVAIDFETADSRRDSACAVGLTKVHGGEIVDRLYGLIRPPRSRFSPFCVNVHGI
HWSDVKDAPPFREFWIENAGFLEGVHFLAAHNARFDRSVLDACCTMAGLPAPNLPFVCTV
DLARNQWNLRPTKLPDVCRHLGLDLNHHHAGSDAEACARIVMAAVDENPCCLTPFGI
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgagttgttccctggtctatgtggccatcgattttgaaacggctgattcgcgtcgcgac
agcgcctgcgccgtgggcctgaccaaggtccacggcggcgagatagtggaccggctctat
ggcctgatccgtccgccgcgttcgcgtttttctccattctgcgtgaacgtgcacggcatc
cattggtccgacgttaaggacgcgcccccttttcgggaattctggatcgaaaacgcgggt
tttctggaaggcgttcattttctggccgcgcacaacgccagattcgatcgctcggtgctt
gatgcctgttgcaccatggccgggctgcctgcgccgaatctgccctttgtttgcaccgtg
gacctggcccgcaaccagtggaatctgcgccccaccaaattgccggacgtctgccgtcac
ctgggccttgacctcaatcatcaccatgctgggtccgatgccgaggcctgcgcccgcatc
gtcatggccgccgtggatgaaaacccctgctgtctgactcctttcggaatatag
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