Desulfomicrobium sp. ZS1: NLA06_12960
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Entry
NLA06_12960 CDS
T08898
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
desu
Desulfomicrobium sp. ZS1
Pathway
desu00470
D-Amino acid metabolism
desu00550
Peptidoglycan biosynthesis
desu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
desu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NLA06_12960 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NLA06_12960 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
desu01011
]
NLA06_12960 (murD)
Enzymes [BR:
desu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NLA06_12960 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
desu01011
]
Precursor biosynthesis
Amino acid ligase
NLA06_12960 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
NAD_binding_8
HI0933_like
DAO
FAD_binding_3
TrkA_N
2-Hacid_dh_C
FAD_oxidored
Pyr_redox
GIDA
Thi4
Pyr_redox_3
Pyr_redox_2
NAD_binding_7
NAD_Gly3P_dh_N
3HCDH_N
FAD_binding_2
YjeF_N
CbiA
Shikimate_DH
adh_short
Sacchrp_dh_NADP
ThiF
Glu_dehyd_C
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
UTF49466
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All DBs
Position
complement(2920382..2921674)
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AA seq
430 aa
AA seq
DB search
MREFIHDNQLRGHTAVVLGAGASGIAAARLLARMGATVRVLEKNEASAAKVPADLGLEVC
AGEHKPAHFEGADLIVLSPGIARSKVAALLPEGVQVVSELELASWFVSEPIIAVTGTNGK
TTTTTLISRILEANGKKVFTGGNIGTPLCEYLLGAEQADILVLEVSSFQLQNSPSFHPRV
GVLLNFSANHLDYHETMEEYLSAKLSMFKHMAEADLAVVPLSMKDELERRDFSRSRRVYF
VASSRFECPGLPGEHNRENMEAAYLACRYFGLSQQDVQRGIDGFSTLAHRIEAVAEHNGI
VFIDDSKSTTIDSMIAALKSQDRPVRLLAGGVFKGGDLGSVLPVLREKVRGVYLFGQSRE
IFEEAWSDCGKEISWDATLEEAVFRAASDARSGECVLLSPATASFDLFANYKERGKTFQR
AVREWVEGAS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaattcatccacgataatcagcttcgcggccacaccgcggtcgtgctgggagcg
ggagcttccggcatcgcggcggcgcgtcttctggcgcgcatgggcgcgactgtgcgcgtg
ctggagaaaaatgaggccagcgcagccaaggttcccgccgacctgggacttgaggtctgc
gccggcgagcacaaacccgcgcatttcgaaggggccgacctcattgttttgagcccgggc
atcgcccgttcgaaagtcgccgcgctcctgcctgaaggcgtgcaggtggtgtccgagctg
gaactggcgagctggttcgtgtccgaacccatcatcgcggtgaccggaaccaacgggaaa
accacgaccacgacgctcatcagccgcattctggaagcaaacggcaaaaaggtcttcacc
ggcggaaatatcggcacgccgctgtgcgagtatctgctgggcgccgagcaggccgacatc
ctggtgctcgaagtctccagtttccagttgcagaattccccgtcctttcatccccgggta
ggcgtgctgctcaatttttcggccaaccacctcgactaccatgagaccatggaagagtac
ctgagcgcgaaactctccatgttcaagcacatggcggaagcggatctggccgtggtgccg
ctgtccatgaaggatgagctggagcgacgggatttctcccgcagccgcagggtctatttc
gtggccagttcccggttcgagtgtccgggcctgcctggcgagcacaaccgcgaaaacatg
gaagcggcctatctggcttgccgctatttcgggctttcccagcaggatgtgcagcgcggc
atcgatggcttctccactctggcgcatcgcatcgaggccgtggcggaacacaacggcatc
gtttttatcgacgattccaagtccacgaccatcgattccatgatcgcggccctcaaaagc
caggaccgccccgtgcgcctgctcgcgggcggcgtgttcaaaggcggcgatcttgggtcg
gtcttgccggttctgcgggagaaggttcgcggcgtgtatctgttcgggcagtcgcgggaa
atttttgaagaggcctggagtgattgcggcaaggaaatcagctgggacgcgacgttggaa
gaggccgtgttcagggccgcttccgacgcccgcagcggagaatgcgtgctcctgtctccg
gccacggccagttttgacctttttgccaactataaggagcggggcaagactttccagcgt
gcggtacgcgaatgggtggagggcgcatcatga
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