Desulfomicrobium sp. ZS1: NLA06_13410
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Entry
NLA06_13410 CDS
T08898
Name
(GenBank) HU family DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
desu
Desulfomicrobium sp. ZS1
Brite
KEGG Orthology (KO) [BR:
desu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
desu03032
]
NLA06_13410
03036 Chromosome and associated proteins [BR:
desu03036
]
NLA06_13410
03400 DNA repair and recombination proteins [BR:
desu03400
]
NLA06_13410
DNA replication proteins [BR:
desu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NLA06_13410
Chromosome and associated proteins [BR:
desu03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NLA06_13410
DNA repair and recombination proteins [BR:
desu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NLA06_13410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
SSPI
Motif
Other DBs
NCBI-ProteinID:
UTF49550
LinkDB
All DBs
Position
complement(3034788..3035027)
Genome browser
AA seq
79 aa
AA seq
DB search
MSHTTQDSHSSPQKAFYAIIREALAQGQGLSLPGLGSFSVMLHAARMGRNPRTGETITIP
ARRRIHFKTGKVLRELLNS
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
ttgtcccatacgacccaggactcccattcttccccgcaaaaggccttctacgcgatcatc
cgcgaagctctggcccaaggccaaggactctctttgccggggcttggttccttttccgtg
atgctccatgccgcgcgcatggggcggaacccgcgcaccggggaaaccatcactattccg
gctcgccggcggattcatttcaagacgggcaaggtactccgggagcttctcaattcatga
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integrated database retrieval system
