Desulfomicrobium sp. ZS1: NLA06_15255
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Entry
NLA06_15255 CDS
T08898
Name
(GenBank) class I SAM-dependent methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
desu
Desulfomicrobium sp. ZS1
Brite
KEGG Orthology (KO) [BR:
desu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
desu03009
]
NLA06_15255
Enzymes [BR:
desu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
NLA06_15255
Ribosome biogenesis [BR:
desu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NLA06_15255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_31
MTS
Methyltransf_25
DUF4027
Methyltransf_11
Methyltransf_15
Fumerase_C
Motif
Other DBs
NCBI-ProteinID:
UTF49896
LinkDB
All DBs
Position
complement(3403556..3404842)
Genome browser
AA seq
428 aa
AA seq
DB search
MDAFFGFSYVLRSLHATGAQDFTAGGIPMRSKDIIVDPQLIIVAGREKSLLRRHPWIFSG
AVATVKGRPASGQTVDVLGQNGKWLARASFSPQSQIMGRVWSFDAEQAIDEGFFERRILE
SAGRRKEFEGASNALRLVHSESDGLPGLILDRYAGVLVFQLLTAGAEFWRETIIGALRRL
FPDDAILERSDVDVRAKEGLAARVEAVHGRIPEQVEIHENGVKYLADVHGGHKTGFYLDQ
RDSRLAVGAAAKGRKVLNCFSYTGGFGLAALGGGAAHVTQLDASAPALALAERNRDANGF
APGSMDTVCGDAFQILRNWHKEGRAFDLIVLDPPKFVDSKASLNRAARGYKDINLCALRL
LNPGGRLFTFSCSGLMEDSLFQKIVADAALDAGRTGRIVRRLTQAGDHPVSLAFPEGAYL
KGLEVLVD
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggacgccttcttcggcttttcctatgtcttgcgcagcctgcacgctaccggcgcgcag
gacttcaccgcagggggcatccccatgcgcagcaaggacatcatcgtggacccacaactc
atcatcgtcgcggggcgggaaaaatctctgctcaggcgtcatccctggatcttttccggt
gccgtggccactgtcaagggcagacctgcatccggacagaccgtggacgtcctcgggcag
aatggaaagtggttggcccgggcctctttttcaccccaatcgcagatcatgggccgggtt
tggagttttgatgctgagcaagccatcgacgaaggattctttgagcgccgcattcttgag
tcggccggcaggagaaaggagttcgagggcgcgagcaacgcgttgcgtctggttcattcc
gagtccgacggtctgcccggtctgattttggatcgctatgccggggttcttgtttttcag
ctgctgaccgcaggcgcggaattctggcgtgaaaccattatcggcgccttgcgccgcctc
ttcccggacgatgccattctggagcgctcggatgtggatgtgcgggccaaggaagggctg
gccgcaagggtggaggccgtgcacggccgcattcccgagcaggtcgagattcatgaaaac
ggcgtgaaatatctggccgatgtgcatggcggtcacaaaaccggtttctacctggaccag
cgcgatagccgcctggccgtgggcgcagccgccaaggggcgcaaggtgctgaactgcttt
tcctacaccggcggtttcggcctggccgctttgggcggaggggcggcgcatgtgacccag
ctcgacgcctcggctccggccctggccctggccgagcgcaaccgggacgcgaacggtttt
gctcccggaagcatggacacggtctgcggcgacgcctttcagattctgcggaattggcac
aaggaaggacgcgcctttgatctcatcgtgctcgacccgcctaaattcgtcgattccaag
gccagcctgaaccgcgcggccagaggctacaaggacatcaatctttgcgctttgcggctc
ctgaaccccggagggcggctttttaccttctcctgctccgggctcatggaagactccctg
tttcagaaaatcgtggccgacgcggccctggacgcaggccgcaccggccgcatcgtccgt
cgcctgacccaggccggcgatcatcccgtctctctggcctttccggaaggggcgtacctg
aaggggcttgaggtgctggtggactga
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