Desulfomicrobium sp. ZS1: NLA06_16045
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Entry
NLA06_16045 CDS
T08898
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
desu
Desulfomicrobium sp. ZS1
Pathway
desu00220
Arginine biosynthesis
desu00240
Pyrimidine metabolism
desu00250
Alanine, aspartate and glutamate metabolism
desu01100
Metabolic pathways
desu01110
Biosynthesis of secondary metabolites
desu01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
desu00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NLA06_16045 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NLA06_16045 (carB)
00220 Arginine biosynthesis
NLA06_16045 (carB)
Enzymes [BR:
desu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
NLA06_16045 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
MGS
CPSase_L_D3
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
RimK
ATP-grasp_2
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
UTF50049
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Position
3585048..3588296
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AA seq
1082 aa
AA seq
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MPKRTDLKKIMLIGSGPIVIGQACEFDYSGTQALKALKEEGYEVILVNSNPATIMTDPNL
ADRTYIEPIEPETVARIIEKERPCALLPTLGGQTGLNTAVAVAENGVLEKYGVELIGASL
PSIKKAESRQLFRKAMENIGLKVPKSGIARTQDDVREWGEKLKFPIIVRPAYTLGGTGGG
VAYNKEDLERIAQQGLAASLTSEVMLEESLLGWKEYELEVVRDKKDNCVIICSIENLDPM
GVHTGDSVTVAPAQTLTDDEYQKMRDASLAIMREIGVETGGSNVQFALNPANGDMMIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITRETMAAFEPTIDYVVIKIPR
FTFEKFPGAEDFLTTAMKSVGETMAIGRTFKEALQKGLRSLETGYPGLGKTFDGQLPDIE
DTLAGLRKPNSRRLYQLRDALLSGISEEEIFEASAIDPWFIRQFKDIVDFEAVLKNVGLQ
GNLSVDNPDFVTVLREAKAMGFSDRQLATIWKRSERDIRSLRKDAGIIPSYKLVDTCAAE
FEAYTPYYYSTYETENEARVSDKRKVVILGGGPNRIGQGIEFDYCCVHASYALREMGIES
IMVNSNPETVSTDYDTSDRLYFEPLTREDVLAIIEQEKPEGVIVQFGGQTPLNLAVPLLR
EGVPILGTTPDSIDRAEDRERFQALLKKLDLLQPNNGTSMSIEEAVIVAARIGYPVVVRP
SYVLGGRAMDIVYDEKDLRTYFEKHVTVVPDHPILIDKFLENAIEIDVDAVSDGEDTYVA
GIMEHIEEAGIHSGDSACVLPPHTLGKMWVQEIERQTKALAKELGVVGLMNIQFALKDEQ
IYILEVNPRASRTSPFVSKATGVPLAKLATRVMMGEKLKDLKPWDMRKGGYYAVKEAVLP
FNRFPGVDALLGPEMRSTGEVMGIDPSFGLAFMKAQLAAGQFLPASGCVFISVNDHDKSG
IIVPAKTFQKLGFTIMSTRGTAAFLAGHGVQCQVVNKVYEGRPNVIDHIKNGDIQLVINT
SSGKRTKEDSSELRRTTVMYGLPYTTNLAAAKALAMAIKERSTSGLDVKCLQEYYQEPGR
DF
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagagaacagatctcaaaaaaataatgcttatcggctctggtcccatcgtcatc
ggacaggcttgcgagttcgattattccgggacccaggccttgaaggccctcaaggaagag
ggctacgaggtcatcctggtcaactccaacccggcgacgatcatgaccgatccgaacctg
gccgaccggacctatatcgagcccatcgagcccgagaccgtggcccgcatcattgaaaag
gaacgcccctgcgcccttcttccgacccttggcggccagaccggcctgaacacggccgtg
gccgtggccgagaacggggtcctggagaagtatggcgtggagctgatcggcgcatccctg
ccgagcatcaaaaaggccgagagccgccagcttttccgcaaggccatggaaaacatcggc
ctcaaggtgcccaaaagcggcatcgcccgcactcaggacgacgtccgcgagtggggcgag
aaactcaaatttcccatcattgtccgccctgcgtacacccttggcggcaccggcggcggc
gtcgcctacaacaaggaagacctggagcgcatcgcccagcagggcctggccgccagtctt
acctccgaggtcatgctggaagagtcgctcttgggctggaaggagtatgagctcgaagtt
gtgcgcgacaagaaggacaactgtgtcatcatctgttccatcgaaaacctggaccccatg
ggcgtgcacaccggcgattccgtgaccgtggccccggcccagaccctgaccgacgacgag
taccagaagatgcgcgacgcctccctggccatcatgcgtgagatcggcgtcgagaccggc
ggctccaacgtgcagttcgccctcaatccggccaacggcgacatgatgatcatcgagatg
aacccgcgcgtgtcgcgctcctcggccctggcctccaaggccaccggcttccccatcgcc
aagatcgctgccaagctggccgtgggctacaccctggacgagctgcagaacgacatcacc
cgcgagaccatggccgccttcgagccgaccatcgactacgtggtcatcaagattccgcgt
ttcaccttcgagaaatttcccggtgccgaagactttctgaccacggccatgaagagcgtg
ggcgagaccatggccatcgggcggaccttcaaggaagcattgcagaagggtctgcgctct
ctggagaccggctatcccggtttgggcaagaccttcgacgggcaactgcccgacatcgag
gacactctggccgggctgcgcaagcccaactcccgtcgcctctatcagctgcgcgacgca
ttgttgtccggaatctccgaggaagagatattcgaggcttcggccatcgatccctggttc
atccgccagttcaaggatatcgtcgattttgaggccgtgctcaagaacgtcggcctgcag
gggaatctgtccgtggacaacccggatttcgtgactgtcctgcgtgaggccaaggccatg
ggattttcggaccggcagctggccacgatctggaagcgcagcgaacgcgacatccgttcc
ctgcgcaaggacgcgggcatcatcccgtcctacaagctggtcgacacctgtgcggcggag
ttcgaggcctacaccccctactattactctacctacgagacggaaaacgaggcacgggtc
tcggacaagcgcaaggtggtcatccttggtggcggccccaaccgcatcggacagggcatc
gagttcgactactgctgcgtgcatgcctcctacgccctgcgcgaaatgggcatcgaatcc
atcatggtcaattccaaccccgagaccgtctccaccgactatgacacctcggaccgcctc
tatttcgagcccctgacccgcgaggacgtgctggccatcatcgagcaggaaaagcccgag
ggcgtcatcgtccagttcggcgggcagactccgctcaatctggccgtgcctcttctgcgc
gaaggcgtgccgatcctcggcaccacgccggactccatcgaccgcgccgaagaccgcgag
cgtttccaggccctcctgaaaaagctcgacctgctgcagcccaacaacggcacgtccatg
agcatcgaagaggccgtgatcgtggccgcgcgcatcgggtacccggtggtggtgcggcct
tcctacgtgctgggcggccgggccatggacatcgtctatgatgaaaaggacctgcgcacc
tattttgagaagcacgtcaccgtggttccggatcatcccatcctcattgacaagttcctg
gaaaacgccatcgagatcgacgttgacgcagtgagcgacggtgaagacacctatgtagcc
gggatcatggagcacatcgaggaggcgggcatccactccggagactccgcatgcgtgctg
cccccgcacaccctgggcaagatgtgggtccaggagatcgagcgccagaccaaggccctg
gctaaggagctcggcgtggtcggcctcatgaatatccagttcgccctcaaggatgagcag
atttacattctggaagtgaacccccgcgcctcgcgcacctcgccctttgtctccaaggct
acgggcgtgcccctggccaagctggccacccgcgtcatgatgggcgaaaagctcaaggat
ctcaaaccctgggatatgcgcaagggcggatattacgcggtcaaggaggcggttctgccc
ttcaaccgcttccccggcgtggacgcgttgctcgggcctgaaatgcgctccaccggcgaa
gtcatgggcatcgacccgtctttcggcctggccttcatgaaggcccagcttgccgccggg
cagttcctgccagcttccgggtgcgtgttcatctccgtcaacgaccacgacaagagcggg
atcatcgtcccggccaagacatttcagaagctcggcttcaccatcatgtccacccggggc
acggccgccttcctggccgggcacggggtgcagtgccaggtggtgaacaaggtctacgaa
ggccgacccaatgtcatcgatcacatcaagaacggggacatccagctggtcatcaacacc
tcctcgggcaagcgcaccaaggaggactcctcggagctcaggcggactacggtcatgtat
ggcctgccctacacgaccaatttggccgcggccaaggctctggccatggccatcaaggag
cgcagcacctccgggctcgatgtgaaatgcctgcaggagtactaccaagaacctggccgg
gatttctaa
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