Desulfomicrobium sp. ZS1: NLA06_16685
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Entry
NLA06_16685 CDS
T08898
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
desu
Desulfomicrobium sp. ZS1
Pathway
desu00550
Peptidoglycan biosynthesis
desu01100
Metabolic pathways
desu01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
desu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NLA06_16685 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NLA06_16685 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
desu01011
]
NLA06_16685 (mrdA)
Enzymes [BR:
desu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NLA06_16685 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
desu01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NLA06_16685 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PQQ
Motif
Other DBs
NCBI-ProteinID:
UTF50170
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Position
3718266..3720059
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AA seq
597 aa
AA seq
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MGAFNTPERPQIFSGPPLLLVFLVVLFCIFSIRLWYLQIYKSDFYQGRAQENRTRQSTMF
SPRGIIRDRTGQLLAENNPAYALALVREDCPDIPKTLDQISRWTGQPRDELQKAFEIGRK
RVKHFDEQVIVPNIPFELVALVEAHRQDWPGLVIAVRPKRSYAYGETLAHVLGYVARANE
EELINDPDLQLGDNVGKQGVELMLERRLRGTKGLQEFEVDASGRVLSSRIVSSPVMGEDL
NLSISLPLQETATKALGDRAGSVVALDADTGEVLALVSLPSYDPNEFVVGISHAKWKELL
EDPLHPLQNRPVQSTYPPGSIFKLAIGGLGLERGTVRPSSTVFCSGSYKLGKRVFRCWNK
GGHGTTDFKKSLRESCDVYYYQLGEQLGVEAISDFAIRCGFGVKTGVELPHERAGNMPTP
EWKLNRFGEKWQGGETLNYAIGQGYTLTTPLQVARFIAALVNDGKILRPTLLLSEKPDVV
GELPMRPATRKLILDAMVATVEEERGTARVLRRPGLRIGGKTGTAQVVKLLDKYEKKKTS
EIPYKYRDHAWMASFGEKDGKRFVVVSMVEHGGHGGSDAGPVAGAVLDALLGVQSEE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcatttaacactcccgagcggccccagatattttccggcccaccgctgttgctt
gtgttcctggtggtccttttttgcatcttcagtatccgtctgtggtatctgcagatctac
aaaagcgatttctatcagggtcgcgcccaggaaaacagaaccaggcagagcaccatgttt
tctccacgaggcatcatccgggatcgcaccgggcagttgctggcggaaaacaaccccgcc
tacgccctggcgctggtgcgcgaggactgcccggacattcccaaaacgttggaccagatc
agtcgttggaccggtcagcctcgggatgaactacaaaaagcctttgagatcggacgcaag
cgggtcaaacattttgacgagcaggtcatcgtgcccaatattccgtttgagcttgtggcc
ctggtcgaggctcaccggcaggactggcccgggcttgtcatcgccgtgcgtcccaagcgt
tcctacgcatacggcgaaacgctggcgcatgtcctgggttatgtggccagggccaatgaa
gaggagctcatcaatgacccggacctgcagctgggcgacaacgtcggcaagcagggcgtt
gagctgatgcttgagcgcaggctgcgcggaaccaagggacttcaggagtttgaggtcgat
gcatccgggcgggtgctgtcttcgcggattgtttcttcgccggttatgggcgaagacttg
aatttgagcatctccctgcccttgcaggagaccgcgaccaaggccctgggggaccgtgca
ggctcggtcgtggccctggacgccgacacgggggaggtgctggccttggtcagtctgccc
agctatgaccccaatgagtttgttgtcggcatcagtcatgcaaagtggaaggaattgctc
gaagatcctctgcatcctctgcagaaccggccagtgcaaagcacctatcctcccggatcc
attttcaagctcgcgataggggggcttgggcttgagcgcggcactgtcaggccttcctcg
accgtgttttgttccggcagctacaagctcggcaagcgagtttttcgctgttggaataaa
ggcgggcacgggacgaccgatttcaaaaaatccctgcgcgaatcatgcgacgtctattat
tatcagcttggggaacagcttggcgtggaagcgatcagcgactttgcgatccgctgcgga
ttcggagtcaagaccggcgtggagctgccccacgagcgggccggaaatatgcccacaccg
gaatggaaattgaaccgctttggagaaaaatggcagggcggagagaccttgaactacgcc
attggtcagggatatacgctgaccacgcctttgcaggtggccaggtttatcgcagcgctg
gtcaatgacggcaagattctgcggccgaccctgcttttatccgagaagcccgacgtggtg
ggtgaactgcccatgcgtcccgcgaccaggaagctgattctcgacgccatggtggccacg
gtggaagaggagcggggcactgcccgggttctccgtcgtcccggactcaggatcgggggc
aagaccggcacggcccaggtcgtcaagcttctggacaagtacgaaaagaagaagaccagc
gaaatcccctacaaatacagggatcacgcctggatggccagcttcggggaaaaggacggg
aaacgtttcgttgtcgtgtccatggtcgagcacggcggtcatggcggttcggatgcgggg
cccgtggccggtgcggtgctcgacgctctcttgggcgttcaatcggaagagtga
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