Desulfomicrobium sp. ZS1: NLA06_17365
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Entry
NLA06_17365 CDS
T08898
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
desu
Desulfomicrobium sp. ZS1
Pathway
desu00541
Biosynthesis of various nucleotide sugars
desu01100
Metabolic pathways
desu01250
Biosynthesis of nucleotide sugars
Module
desu_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
desu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NLA06_17365 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
desu01005
]
NLA06_17365 (rfaD)
Enzymes [BR:
desu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
NLA06_17365 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
desu01005
]
Core region
NLA06_17365 (rfaD)
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
DAO
KR
NAD_binding_8
adh_short
Motif
Other DBs
NCBI-ProteinID:
UTF50290
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All DBs
Position
3854922..3855905
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AA seq
327 aa
AA seq
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MIIITGGAGFIGSAMVWELNQQGYRDIVVVDNLASTNKWRNLVGLAYHRYIQKDNFLDLL
NTRYMEGRIEAVIHLGACSATTEADCDYLIRNNLEYSKAMCRFAQERNARFIYASSAATY
GDGSRGFDDSDEAMEGLHPLNMYGYSKHLFDLWLKGDGLLGTMAGLKFFNVFGPNEYHKD
DMRSVICKAFTQIRQTGKLKLFKSYRKEYADGEQRRDFVYIKDCVKVIDWLIKNPEVGGI
FNVGTGQARTWNDLARGVFTAMGREPQIEYVDMPDTLRGKYQYYTCADLTKLASHGCDVD
FRPLEDGVTDYVQNYLMHGYSHLTSRY
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcattaccggcggcgcgggtttcatcggcagcgccatggtctgggaattgaac
cagcagggatacagggacatcgtcgtggtcgacaatctggcttccacgaacaaatggcgc
aacctggtcgggctggcctatcatcggtatatccagaaagacaacttcctggatttgctg
aacaccagatatatggaaggtcggatcgaggctgtgattcatcttggagcctgctccgcg
accacggaagcggactgtgattatctcatccgcaacaacttggaatattccaaggccatg
tgccgcttcgcccaggagcgcaacgcccgttttatctacgccagttccgccgcgacctac
ggcgacggtagccgcggcttcgatgactcggatgaggccatggaagggttgcatccgctc
aatatgtacggctattccaagcatctgttcgacctctggctcaagggcgacgggctcctt
ggcacgatggccgggctcaaattcttcaatgtcttcggccccaacgaataccacaaggac
gacatgcgctccgtgatttgcaaggccttcacccagatccggcagacgggaaaattgaaa
ctcttcaaatcctaccgcaaggaatacgccgacggtgagcagcgccgggatttcgtctat
atcaaggattgcgtgaaggttatcgactggctgatcaagaacccggaggtgggcggcatc
ttcaatgtgggcacgggccaggcccggacctggaacgacctggcgcggggtgtgttcacg
gccatgggccgggagccgcagatcgaatatgtggacatgccggacaccttgcgcggcaag
taccagtactacacctgcgccgacctgaccaagctcgccagccacggctgcgacgtggat
ttcaggccgctggaggacggggtcacggactatgtgcagaattacttgatgcacggttat
tcacacctgacgtcacggtactga
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