Dehalococcoides mccartyi 195: DET0502
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Entry
DET0502 CDS
T00223
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
det
Dehalococcoides mccartyi 195
Pathway
det03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
det00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DET0502 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
det03021
]
DET0502 (rpoA)
03400 DNA repair and recombination proteins [BR:
det03400
]
DET0502 (rpoA)
Enzymes [BR:
det01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DET0502 (rpoA)
Transcription machinery [BR:
det03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DET0502 (rpoA)
DNA repair and recombination proteins [BR:
det03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DET0502 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF2325
Motif
Other DBs
NCBI-ProteinID:
AAW40256
UniProt:
Q3Z953
LinkDB
All DBs
Position
459132..460124
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AA seq
330 aa
AA seq
DB search
MSDLAIPTISCTESDGKYGRFVVEPLEKGFGTTMGNSLRRILLSYLDGVAITRVRIDGIQ
HEFSALPKAKEDTLDFLLNLKNIRVESLSGLEGILYLKASGAKVVTAADIEPSNDFEVVN
PELYLLTLDSDDAVLNVELEVELGRGYRAPESTENTPIGTIPVDAIFTPIRKVNFTTEPM
HVGRETSLERLVLEVWTDGTIEPATAVSRSADILVKQFAALVSHNKVVAEVEASEPVKYA
IPEEKYNMPIEQLDLSVRAVNCLRHAGITTVGEVINRGTKELLTLRNFGLKSLTELEDRL
KTIGLSLNPEEELFEDAENSKKKNKGMDEA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgatctagctatacccacaattagttgcaccgaaagcgacggtaaatacgggcgc
tttgtggtagaacctttggaaaaaggtttcgggactactatgggtaattcacttcgccgt
atacttcttagctatctggacggggttgccattacccgcgtcaggatagacggcattcag
catgagtttagcgctctgccgaaagccaaggaagatacactggattttttgctgaacctt
aaaaatataagggtggaaagcctgtccgggcttgagggtattttatacctgaaggcttca
ggtgcaaaggtagttacagcagctgatattgaaccctcaaatgattttgaggtagtaaac
ccggagctgtacctgcttacccttgattcagatgatgcagttttgaatgtggaacttgag
gtggaacttggccggggctatcgggctcctgagagcaccgagaatacgcctataggcact
attccggtagatgccattttcactcccatccgcaaggtgaactttaccactgagcctatg
cacgtaggccgtgaaaccagccttgagcgtttggtgcttgaggtctggactgatggaact
atagaaccggctactgccgtcagccgctcagcggatattctggttaaacagtttgcggct
ctggtcagccataacaaggtagtggctgaagtagaggccagcgaaccggttaaatatgct
atacccgaagaaaaatataatatgcccattgagcagctggatttgtccgtcagggctgtc
aattgtttgcggcatgccggtataacaacggtgggtgaagttataaacaggggtaccaaa
gagctgctgactctgcggaattttggtcttaaatctctgaccgagcttgaagacaggctt
aagactatcggtctgtcgttgaaccccgaagaagagttgtttgaggatgctgaaaacagc
aagaagaaaaacaagggcatggacgaagcctaa
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