Dehalococcoides mccartyi 195: DET0549
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Entry
DET0549 CDS
T00223
Name
(GenBank) exonuclease SbcC, putative
KO
K03546
DNA repair protein SbcC/Rad50
Organism
det
Dehalococcoides mccartyi 195
Brite
KEGG Orthology (KO) [BR:
det00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
det03400
]
DET0549
DNA repair and recombination proteins [BR:
det03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DET0549
Archaeal homologous recombinant proteins
DET0549
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_29
SbcC_Walker_B
AAA_21
Rad50_zn_hook
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AAW40153
UniProt:
Q3Z906
LinkDB
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Position
complement(503356..505935)
Genome browser
AA seq
859 aa
AA seq
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MIPVKLKIKNFMCYRGEIPPFSFNGVHTACICGQNGAGKSALIDAITWALWGKSRAKSDD
DVVSLNEQEAEVSLDFEISGELYQVIRQRQRPKKAGANGQSLLSLFAIKDGKPLNITGDT
LTQTEKKIISILHMDYDTFINSAFLRQGHANQFTQQPPGKRKEVLSNILGLEIYDQLEDL
ARQAVREAEAKKLLIEQSIADGQEGLKSRPELEETLKNTRLDLTDGEEKLKTHLAKLEIL
RHKKHAFDAKQSACLQIEKDLRDISKDQSLWLQNQQEIKERISTFETLIAQEEAILKGYK
EYSDCQSLYEKHNRILAKLRQLEKEKKPLEDAVYKEENSLKNTLTKYQEHLKMRQETAQT
LGTLEQEKTLSDQLHLELENEETALKARQTRLADMQGSLAGLETEYAGTAREINSLEEKL
KLLTEAGESRCNCPLCETELGHDKLKLVFGKYRTEQDAKEKQQSSLKLKLEQLRLDIQTL
TAQIETETKRLNQKRRQYEGQLSVLEKGIADAKDAGTKAAKGRELISDIEKQLNQRSYAV
SEQASLAVIEKEIQELNFDNAEYTQNQQTLAGLTHFEEQKRKLDDAQSRLPREKDSLEKT
ASALAELTARHNTKLSEQQTLQRELAELPALEQELETAEAGYKSLSQTQDTLRQQLGSLS
QKEEQLNELEKKLKKQEQDKEQTAKEIYYFGKLARAFGKKDGIQTMLIEDTLPELESGAD
LLLSRMTDGRMHLSIETQRSTKKGDQTETLDINISDELGTRNYETFSGGEAFRIDFAVRI
ALSRLLANRLGAPLRTLIIDEGFGTQDSTGIERLKEAINSIQDEFDKILVITHIDDLKDS
FPTRIEIDKTPSGSAIRLN
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtcaaactcaaaataaaaaactttatgtgctaccgcggcgaaattccgcct
ttttcttttaacggggtgcataccgcctgcatctgcggccagaacggggccggcaaatct
gccctgatagatgccattacctgggcactctggggaaaaagccgggctaaaagtgatgat
gacgtggtctctttgaacgaacaggaagccgaagtaagccttgattttgaaatttcaggg
gaactgtatcaggttatccgccagcggcagcggcctaaaaaagcaggggcaaacggacaa
agcctgctgagcctgtttgccattaaggacgggaaacccctgaatatcaccggggatact
ctgacccaaacagagaagaagataatttccatattgcatatggactatgacacctttata
aacagtgcttttctgcggcaggggcatgccaaccagtttacccagcagccccccggcaaa
cgcaaggaagtactctccaatatacttgggttagaaatatatgaccagctggaagacctg
gccagacaggccgtacgcgaggcagaggctaaaaaactgcttatagagcagagtattgca
gacggccaagaagggctaaaatccagaccggaactggaagaaactttaaaaaatacccgc
ctggatctgacagatggtgaggagaaactgaaaacccatcttgccaaactggaaatccta
aggcacaaaaaacatgcctttgatgccaaacaaagtgcctgcctccagatagaaaaagac
ctgcgggatatatcaaaagaccaatccctttggcttcaaaaccagcaggaaataaaagag
cgtatcagcacctttgaaacactcatcgctcaggaagaagcgattctcaaaggctataag
gaatactcagactgccaaagcctgtatgaaaaacacaaccgaatactggcaaaactaagg
cagctggaaaaagaaaaaaaaccgctggaagatgccgtttataaagaagaaaacagcctg
aaaaacaccctgactaaatatcaggaacacctcaaaatgcggcaggaaaccgcccagact
ttgggcacactggaacaagaaaaaaccctgtcagaccaactgcacctggagctggaaaat
gaagagactgccttaaaagcccggcaaaccaggctggcggatatgcaggggagtttagcc
ggactagagaccgagtatgccggtacagccagggaaataaactctctggaagaaaaacta
aaactgcttaccgaagcaggtgaaagccgctgcaactgccccctgtgcgaaaccgagctg
gggcatgacaaactcaaactggtattcggcaaataccggacagaacaagatgctaaggaa
aaacagcaaagcagcctgaaactaaagcttgagcagctgaggctggatatacagacccta
actgcccaaattgaaactgaaaccaaacgcttaaaccaaaagcgcaggcagtatgaggga
cagctgagcgtactggaaaaagggattgcagacgccaaagatgccggaaccaaagcggca
aaaggcagagagctgatttcggatattgagaagcagctgaaccaacgcagttatgccgtt
tccgagcaagccagtctggcagtaattgaaaaagaaatacaggaacttaattttgataac
gccgaatacacccaaaaccagcaaactttggccggcctgacccattttgaggagcaaaaa
cgcaaactggacgatgcacaaagccgcctgccacgggaaaaagatagcttggaaaaaacg
gcttcagcactggcagaactcaccgcccgccataatactaaactgagtgagcagcaaacc
ctgcaaagagaactggctgaactgcccgcactggagcaggagctggaaaccgccgaagcc
ggatacaagtcactcagccaaacgcaagataccttgaggcaacaactgggttcgctcagc
cagaaagaagaacagctgaacgaacttgaaaagaagctgaaaaaacaggagcaggataaa
gagcaaaccgccaaagaaatatactactttggtaaactggccagagctttcggcaagaaa
gacggcatccagaccatgcttattgaagacaccctgccggaactggaaagcggggcagac
ctgctgctgtcacggatgactgacgggcgtatgcatctgagtatagaaacccagcgttcc
accaaaaagggagaccagaccgagacgctggatataaatatctcggatgagctgggcacc
cgcaactacgaaacattcagcgggggtgaggctttcaggatagattttgcggtcaggatt
gccctgtcacgcctgctggcaaaccgtctgggcgcacccttgcggacgctgattattgat
gaaggcttcggcacacaggactcaaccggtattgaacgtctgaaagaggctataaactct
attcaggatgaatttgataaaatactggtcataacccatatagatgacctgaaagattct
ttccccacccgcattgagatagataaaaccccgtcaggctcagctatacgcttaaactaa
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