Dehalococcoides mccartyi 195: DET0970
Help
Entry
DET0970 CDS
T00223
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
det
Dehalococcoides mccartyi 195
Pathway
det03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
det00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DET0970 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
det03019
]
DET0970 (pnp)
03016 Transfer RNA biogenesis [BR:
det03016
]
DET0970 (pnp)
Enzymes [BR:
det01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DET0970 (pnp)
Messenger RNA biogenesis [BR:
det03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DET0970 (pnp)
Transfer RNA biogenesis [BR:
det03016
]
Prokaryotic type
tRNA degradation factors
DET0970 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_KhpA-B
S1_RRP5
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
Alg14
Motif
Other DBs
NCBI-ProteinID:
AAW39716
UniProt:
Q3Z7V6
LinkDB
All DBs
Position
889292..891454
Genome browser
AA seq
720 aa
AA seq
DB search
MITANSFERTIGGRKLTIESGKMARLADAAVTIRYADTELLVTLCAAKKPREGVDFLPLT
IDYEERMYAAGKIPGGFIRREGRPSEQAILAGRLTDRPLRPLLPKEWRNELQIIITVIAS
DKENDADIWGVVGASTVLTMSQIPYEGPVGASRVGYTNGEFVLNPTFAQLEQSQMDLVVV
STRKAVVMIEAGSKEIPEDLMIKAIEFAHQANQELIDLQDEIRAKLGKEKLPVPVLEIPE
EVKAAVAAFVKGRVNEALSHQDKTLRENAVEALQSELVEALAETYAEGDILAAYDKEIKK
AIRSTILEKDIRVNGRGIKQLRQLDAETGILPRVHGSALFTRGDTQVMAITTLGSLQEAQ
QLDGLSAEDTKRFMLHYNFAPFSTGEVKRSGSPGRREIGHGALAERALVPVLPTPEEFPY
TIRMVADVVGSSGSTSMGSVCSSSLSLMDAGVPVKKAVAGISIGLITGENDTYCTITDIE
GIEDNYGDMDFKVAGTRDGITAIQVDMKVKGISFDVIRDAIYQAKEARYTILEVMDKALA
QPKTELSPYAPRMYKISIDPSKIGSVIGSGGKTIRSIIEQTNTTVDIENDGTVVIGATDE
ASAQKAIKIIEDLTKDVEAGSVYTGKVTRIMTFGAFVEILPGKEGMVHISELADHRVEKV
EDVVKVGDEITVKVTEIDSQGRINLSRRVILNPNAVPISRNRDSQPRRSGPFRPQDRSNS
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
ttgataactgccaactcatttgaacgaactattggcggcagaaaacttactatagagagc
gggaaaatggcccgccttgcagatgccgcagtaactatccgctatgcggataccgaatta
ctggtaacactttgtgctgccaaaaaaccgcgcgaaggggtggatttcctccccctgact
atagactacgaagagcggatgtatgccgcaggcaaaatccccggcgggtttatccgccgc
gaaggacgccccagtgaacaggctattttggccggacgtctgacagacagacctctccgc
ccccttctccccaaggagtggcggaatgaacttcagattattatcaccgtaattgcctca
gacaaggaaaatgacgctgatatctggggtgtggtaggtgcttcaaccgttcttaccatg
tcacaaataccctacgaaggcccggtgggagccagccgcgtaggttatacaaacggcgaa
ttcgtgcttaaccccacctttgcccagctggaacaaagccagatggatttggtggtagtc
agcacccgtaaagccgtagttatgattgaagccgggtctaaggaaattcccgaagacctt
atgattaaagcgattgagtttgcccatcaggcaaatcaggagcttattgacctgcaggat
gaaatccgcgccaagctgggcaaggaaaaactgccggtgccggtgctggaaatacccgaa
gaagtcaaagcagcggtagccgcctttgtaaaagggcgagtaaacgaagccctgagccat
caggataaaaccctccgtgaaaatgcggttgaagcccttcagagcgaactggttgaagct
ttggcagagacatatgccgaaggcgatattctggccgcttatgataaagaaatcaaaaag
gctatccgctcaactatacttgaaaaagatatcagggtaaacggacggggtattaagcag
ctccgccagctggacgctgaaacaggtattctgccccgcgttcacggttcagctttgttc
acccggggtgatacccaggttatggccattaccacactgggttctttgcaggaagcccag
cagctggacggcttgagtgccgaagataccaagcgttttatgcttcactataattttgcc
cccttctctaccggtgaagttaagcgttccggctcccccggacggcgtgaaatcggtcat
ggtgctttagctgaaagggctttggtgcctgtcctgcccactcccgaagaatttccctat
accattcgtatggtagctgacgtagtcggttcatcaggctctacttctatgggcagtgtc
tgttcgtccagtttgtcacttatggatgcaggtgtaccagttaaaaaagctgttgccggt
atttccatcggccttattaccggtgaaaatgatacctactgcaccattactgatattgaa
ggtattgaagataactacggcgatatggatttcaaagttgccggtacccgtgacggcata
accgccatacaggtggatatgaaagtcaagggtatcagctttgacgttatccgtgacgct
atctaccaggccaaagaagcccgctataccatactggaagtaatggacaaggctcttgcc
cagcccaagaccgagcttagcccttacgcccccagaatgtacaagataagcattgacccc
tccaagattggcagtgttatcggcagcggcggcaagaccatccgctctattattgagcag
accaataccaccgttgatattgaaaatgacggcacagtggtcatcggtgctactgacgaa
gcttcggcccaaaaagctataaagataattgaagacctgaccaaagatgtagaagccggc
agtgtttataccggtaaagttacccggataatgacctttggtgcttttgttgaaatcctg
cccggcaaagagggcatggtacacataagcgaactggccgaccacagagtggaaaaagtg
gaagacgtagttaaagtgggtgacgaaataacagtaaaggtaactgagattgattcacag
ggcagaataaacctgtcacgccgggtcattctcaatcccaatgctgttcccatctcccgc
aaccgtgattcccagccgcgccgttccgggcctttccgccctcaagaccggtctaactca
taa
DBGET
integrated database retrieval system
